Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1632g00008 ATGCTGAATTTAGGAGATCCGATATCAACACATCTGGAACTGAAAGCCAGTTATATAGAAGGAGAATTTAATCAAAATATCTCCAAAGGCTTTGATGGATCTTTCATTGCTAACAGTTCAACATCTGAAACAAAGGAAACCTCCGTACCTGAAATTAGTACTTCAAGTACAGGGCATGAGACACAGCAAAAAGAAATGGAATTAGTGGAACCACTTTGTGATGCAATGGTTTCTCTGCCTATTATTGAAGAAGGTGAGTTTGAGAAGGAAGAACGTGGTCAAAGGGTTCATGTAGCAACACACCTTTCTCTAGATGATGGTATGGAATATAACGACCCGTTGAATTTTAGTATTGAGCTTGAGAGACTACAAAAGGAAATGGAATTGGTGAAACCTGTTTCTGCTGCAGTTGTTTCTTTTCGTACTGCTGAAGAGGGTAAGTATGAGAAGGAAGAACAACGTGGTCAAAAGGCATGTGAGGCTATTCAATTTTCTGTGGATCAGGGTATGAATAATGAAGAATCAAATTCAACTGTAAAGCATGAGAAACAAAAAAAGGAAATGGACTCAGCAAAACCAGCTTGTGCTGCAATGGTTTCTCTTCCTACTACCAAAGAGGGTAAGCTTGACAAGGAAGAACAACACGGTCAAAAGGCTTCTGAAGCAATGCATGTTTCTGTGGATCAGGCTATGAATAGTGAAGCATTGATTTCAAGTATAAATCCCAATAGACAACAAAAGGAAATGGAACTGGTGAAACCTGTTTCTGCTGCAATTATTTCTCTTCCTACTACTGAAGAGGGTGAGTTTAAGAAGGAAGAACAACAGGGACAAAGGGTTCCTGAAGCAATGCAATTTTCTATGGATGAGGGTGTGAATAATGAAGCATCAAATTCACATATAAAGCATGAGAAACAGCAAAAGGAAATGAACTCATCAAAACCAGTTTGTGCTGCAATTGTTTCTCTTCCTACTACCAAAGAGGGTGAGCTTGAGAAGAAAGTACAAGATGGTCAGAAGGTTCCTGAAGCAATGCACATATCTGTAGATCATGGCATGGATATTGAATCATTGATTTTAACAACAAAGCCTAAAAGCCAACATAATCCAATGGAATTGGCGAAACCTGGCTGTGCTGCAATCGTTTCCCTTCCTGATATTGAAGAGGATGAACTTGAGAAGGAAGAACATAATTGTAGTGATGGTTCCAAATCCACTAAGACGTATGTAAGGAAGAGTAAGAAGAGGGATTTGGGCCTCTCGGACATAGAGCCATCAGGTAGAAAGGTCCCTGAAGCAATGGACTTATCTGTTAATCAGGGTATCAACGGTGAAACATTGAATGTGGGCAACTATAGCGAAGAGATGTGGTTCATGGACATTGATATTTTGGATGCTAAACATGAAATGCGGCATGAAAAAGAGCAGCCAGAAAAAATAACTTGTGCAAATGGTGCAATATTTTCCAATCATCCAGATAAGAAAGAAGGCATTGAAGAGGGAGAAATTTCAGGTGACTTTAGAATGGATGAGAATTCAATTGATACGTCTTCTGCAGATTCCTTGATGATAGAACAGAGGGAACATGATGTACACAAGCTCCAACATGTTATTGAAAATATAGTATTTCCTTTTAACACACAGAAAGAAGAAAAAGAAAAACAATATGAATCAACTCAAGATAACAGTAGACTAATGCAACCTAGGAAAAGTGATAAAAATGGGCTTCCAAATGGAGTTGACTTTGGAATCTCTCGGGAAATTGTTGATTATGGGGATTTAGTGGAGCATGGTTCTGTATCGGTTACTGCAAAAAGTGAAGACGGGGGAATTAAAGGTGTTGTTGGCTTGCCACCCACTTTGGCTAACAAAGAAGTCTCGCCCGCAGAAGAAGCCACTGATGATCATCAAAACACATCTGCAGTAAGGAAAGCTGGCATCAGTTGTAAGAAAAAGCGTGGTCCTGTTACTGAGGAAAGGAAGGCCAAAAAGAAGGAAAAGAAAAGAAAGAAGCGGGCAGAAAAGAACAGAAAACTTGGGGTTAAAAGGTTGAAGCTGCAGCCAGTACAGAAACCAAAAACTATCACATATTGCCGCCATTATCTGAAGGGAAGGTGCCATGAGGGTGACAAGTGCAAGTTCTCACATGACATAGTGCCTCTGACAAAATCGAAGCCGTGCTGTCACTTTGCTCGTCACTCTTGCATGAAAGGTGATGACTGTCCATTTGATCATGAGCTTTCCAAGTATCCTTGTAGCAATTTTGTGAGTAAAGGATCTTGCAGCAGAGGGAATGCTTGTATGTTTTCACACGAGATGCCAACCAAACAAGATGTTGCTACATCTTCAAATGATAGCAAAGCTGAGTTGGAGCCTAAACTATTAGGAAATGCAAACTTAAGCAAGCCGCCTAATATCAGCAGCAGCAGTGCTTCTCAGCAAAAACAGATCTCTGATTCAAAAGGAATTCAAACTCACTTGAATTCAGAAAAAGAGGTGACAGACACTGTAAAGAAACCACCGACAATGGCACCTAAAGGAATTAGTTTCATCAATTTTTCGAAATCATCTTCTCGAAAACAAGGAATGGTAACGCCAGACAAGGGAAATTCTGTTCAAATTGGGACCCTTTCTAATCAAAGTGCATCGGGCACGGCTTTAAACTTGATGAATCCTGGGAAAACGCCAGTGGGGGTACCTAAAGGAATTAATTTCCTTTCATTTGGAAAAGGTCGTATTTCCGGTTTCAAAAGTACTGTTTCCTCCTTTCTGAATAAGGAAAGTGGTATCAAGTTGTCTCAGAAAGGAAGTTTAGGTACGCCTGAACAAGCATCTCTAGAGAAGGATGATGGCAGTAAAATTGGCATTGGGCTGCAGACTGCTGTGTGCTCAAATGAGACTTTAAAGGAAAATCAATGTGTAGCGGGGAAAATGGATTTGGGTTTCCAAGGAAAAGCTTCAATACATCGTTATAGTAATGGTGTACAATTTAGCTCAACCTCTCATCAGGATCACAGTCTTAGTAGATCAGTGCAAGAGGGAGCTAAGGCATATACTCCTCAGACTTCAACTCTGACCTCATCTATGTTTCCAACTTCTCCATTTATTTCAGGTCAATCTTCAGAACGGTTAGCACCAGGACATCATAAGCACGTATATAACTCTGCTCAAAGGGCACTGTTATCAACTCTATCATTTGCAGCAGAGCACGAGTCCAATATTAAGCTAAAGTCCCCTTTTGGTGCATCAGCTGTGAAATTAGAGATGAACAAGGCTGTATAG 3282 0.4022 MLNLGDPISTHLELKASYIEGEFNQNISKGFDGSFIANSSTSETKETSVPEISTSSTGHETQQKEMELVEPLCDAMVSLPIIEEGEFEKEERGQRVHVATHLSLDDGMEYNDPLNFSIELERLQKEMELVKPVSAAVVSFRTAEEGKYEKEEQRGQKACEAIQFSVDQGMNNEESNSTVKHEKQKKEMDSAKPACAAMVSLPTTKEGKLDKEEQHGQKASEAMHVSVDQAMNSEALISSINPNRQQKEMELVKPVSAAIISLPTTEEGEFKKEEQQGQRVPEAMQFSMDEGVNNEASNSHIKHEKQQKEMNSSKPVCAAIVSLPTTKEGELEKKVQDGQKVPEAMHISVDHGMDIESLILTTKPKSQHNPMELAKPGCAAIVSLPDIEEDELEKEEHNCSDGSKSTKTYVRKSKKRDLGLSDIEPSGRKVPEAMDLSVNQGINGETLNVGNYSEEMWFMDIDILDAKHEMRHEKEQPEKITCANGAIFSNHPDKKEGIEEGEISGDFRMDENSIDTSSADSLMIEQREHDVHKLQHVIENIVFPFNTQKEEKEKQYESTQDNSRLMQPRKSDKNGLPNGVDFGISREIVDYGDLVEHGSVSVTAKSEDGGIKGVVGLPPTLANKEVSPAEEATDDHQNTSAVRKAGISCKKKRGPVTEERKAKKKEKKRKKRAEKNRKLGVKRLKLQPVQKPKTITYCRHYLKGRCHEGDKCKFSHDIVPLTKSKPCCHFARHSCMKGDDCPFDHELSKYPCSNFVSKGSCSRGNACMFSHEMPTKQDVATSSNDSKAELEPKLLGNANLSKPPNISSSSASQQKQISDSKGIQTHLNSEKEVTDTVKKPPTMAPKGISFINFSKSSSRKQGMVTPDKGNSVQIGTLSNQSASGTALNLMNPGKTPVGVPKGINFLSFGKGRISGFKSTVSSFLNKESGIKLSQKGSLGTPEQASLEKDDGSKIGIGLQTAVCSNETLKENQCVAGKMDLGFQGKASIHRYSNGVQFSSTSHQDHSLSRSVQEGAKAYTPQTSTLTSSMFPTSPFISGQSSERLAPGHHKHVYNSAQRALLSTLSFAAEHESNIKLKSPFGASAVKLEMNKAV 1093
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1632g00008 1093 ProSiteProfiles Zinc finger C3H1-type profile. 721 745 IPR000571 GO:0046872
Pral1632g00008 1093 SUPERFAMILY CCCH zinc finger 750 776 IPR036855 GO:0046872
Pral1632g00008 1093 Coils Coil 656 676 - -
Pral1632g00008 1093 Gene3D - 723 787 - -
Pral1632g00008 1093 SMART c3hfinal6 721 747 IPR000571 GO:0046872
Pral1632g00008 1093 SMART c3hfinal6 693 718 IPR000571 GO:0046872
Pral1632g00008 1093 SMART c3hfinal6 749 773 IPR000571 GO:0046872
Pral1632g00008 1093 MobiDBLite consensus disorder prediction 38 62 - -
Pral1632g00008 1093 ProSiteProfiles Zinc finger C3H1-type profile. 692 719 IPR000571 GO:0046872
Pral1632g00008 1093 MobiDBLite consensus disorder prediction 625 679 - -
Pral1632g00008 1093 MobiDBLite consensus disorder prediction 663 679 - -
Pral1632g00008 1093 MobiDBLite consensus disorder prediction 549 579 - -
Pral1632g00008 1093 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEI 310 1083 IPR045124 GO:0003723|GO:0045892
Pral1632g00008 1093 MobiDBLite consensus disorder prediction 170 192 - -
Pral1632g00008 1093 Pfam CCCH-type zinc finger 698 717 IPR041367 -
Pral1632g00008 1093 MobiDBLite consensus disorder prediction 800 824 - -
Pral1632g00008 1093 MobiDBLite consensus disorder prediction 176 190 - -
Pral1632g00008 1093 FunFam C3H-type transcription factor 650 721 - -
Pral1632g00008 1093 SUPERFAMILY CCCH zinc finger 692 717 IPR036855 GO:0046872
Pral1632g00008 1093 ProSiteProfiles Zinc finger C3H1-type profile. 746 774 IPR000571 GO:0046872
Pral1632g00008 1093 MobiDBLite consensus disorder prediction 796 849 - -
Pral1632g00008 1093 Gene3D - 648 722 - -
Pral1632g00008 1093 MobiDBLite consensus disorder prediction 38 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1632g00008 Pral-Chr1632 33538 40004 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Pral1632g00008 zf-CCCH_4 2e-06 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1632g00008 - - pcin:129320444 1380.93