Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1632g00007 ATGCTGAATTTAGGAGATCCGATATCAACACATCTGGAACTGAAAGCCAGTTATATAGAAGGAGAATTTAATCAAAATATCTCCAAAGGCTTTGATGGATCTTTCATTGCTAACAGTTCAACATCTGAAACAAAGGAAACCTCCGTACCTGAAATTAGTACTTCAAGTACAGGGCATGAGACACAGCAAAAAGAAATGGAATTAGTGGAACCACTTTGTGATGCAATGGTTTCTCTGCCTATTATTGAAGAAGGTGAGTTTGAGAAGGAAGAACGTGGTCAAAGGGTTCATGTAGCAACACACCTTTCTCTAGATGATGGTATGGAATATAACGACCCGTTGAATTTTAGTATTGAGCTTGAGAGACTACAAAAGGAAATGGAATTGGTGAAACCTGTTTCTGCTGCAGTTGTTTCTTTTCGTACTGCTGAAGAGGGTAAGTATGAGAAGGAAGAACAACGTGGTCAAAAGGCATGTGAGGCTATTCAATTTTCTGTGGATCAGGGTATGAATAATGAAGAATCAAATTCAACTGTAAAGCATGAGAAACAAAAAAAGGAAATGGACTCAGCAAAACCAGCTTGTGCTGCAATGGTTTCTCTTCCTACTACCAAAGAGGGTAAGCTTGACAAGGAAGAACAACACGGTCAAAAGGCTTCTGAAGCAATGCATGTTTCTGTGGATCAGGCTATGAATAGTGAAGCATTGATTTCAAGTATAAATCCCAATAGACAACAAAAGGAAATGGAACTGGTGAAACCTGTTTCTGCTGCAATTATTTCTCTTCCTACTACTGAAGAGGGTGAGTTTAAGAAGGAAGAACAACAGGGACAAAGGGTTCCTGAAGCAATGCAATTTTCTATGGATGAGGGTGTGAATAATGAAGCATCAAATTCACATATAAAGCATGAGAAACAGCAAAAGGAAATGAACTCATCAAAACCAGTTTGTGCTGCAATTGTTTCTCTTCCTACTACCAAAGAGGGTGAGCTTGAGAAGAAAGTACAAGATGGTCAGAAGGTTCCTGAAGCAATGCACATATCTGTAGATCATGGCATGGATATTGAATCATTGATTTTAACAACAAAGCCTAAAAGCCAACATAATCCAATGGAATTGGCGAAACCTGGCTGTGCTGCAATCGTTTCCCTTCCTGATATTGAAGAGGATGAACTTGAGAAGGAAGAACATAATTGTAGTGATGGTTCCAAATCCACTAAGACGTATGTAAGGAAGAGTAAGAAGAGGGATTTGGGCCTCTCGGACATAGAGCCATCAGGTAGAAAGGTCCCTGAAGCAATGGACTTATCTGTTAATCAGGGTATCAACGGTGAAACATTGAATGTGGGCAACTATAGCGAAGAGATGTGGTTCATGGACATTGATATTTTGGATGCTAAACATGAAATGCGGCATGAAAAAGAGCAGCCAGAAAAAATAACTTGTGCAAATGGTGCAATATTTTCCAATCATCCAGATAAGAAAGAAGGCATTGAAGAGGGAGAAATTTCAGGTGACTTTAGAATGGATGAGAATTCAATTGATACGTCTTCTGCAGATTCCTTGATGATAGAACAGAGGGAACATGATGTACACAAGCTCCAACATGTTATTGAAAATATAGTATTTCCTTTTAACACACAGAAAGAAGAAAAAGAAAAACAATATGAATCAACTCAAGATAACAGTAGACTAATGCAACCTAGGAAAAGTGATAAAAATGGGCTTCCAAATGGAGTTGACTTTGGAATCTCTCGGGAAATTGTTGATTATGGGGATTTAGTGGAGCATGGTTCTGTATCGGTTACTGCAAAAAGTGAAGACGGGGGAATTAAAGGTGTTGTTGGCTTGCCACCCACTTTGGCTAACAAAGAAGTCTCGCCCGCAGAAGAAGCCACTGATGATCATCAAAACACATCTGCAAAAGCTGGCATCAGTTGTAAGAAAAAGCGTGGTCCTGTTACTGAGGAAAGGAAGGCCAAAAAGAAGGAAAAGAAAAGAAAGAAGCGGGCAGAAAAGAACAGAAAACTTGGGGTTAAAAGGTTGAAGCTGCAGCCAGTACAGAAACCAAAAACTATCACATATTGCCGCCATTATCTGAAGGGAAGGTGCCATGAGGGTGACAAGTGCAAGTTCTCACATGACATAGTGCCTCTGACAAAATCGAAGCCGTGCTGTCACTTTGCTCGTCACTCTTGCATGAAAGGTGATGACTGTCCATTTGATCATGAGCTTTCCAAGTATCCTTGTAGCAATTTTGTGAGTAAAGGATCTTGCAGCAGAGGGAATGCTTGTATGTTTTCACACGAGATGCCAACCAAACAAGATGTTGCTACATCTTCAAATGATAGCAAAGCTGAGTTGGAGCCTAAACTATTAGGAAATGCAAACTTAAGCAAGCCGCCTAATATCAGCAGCAGCAGTGCTTCTCAGCAAAAACAGATCTCTGATTCAAAAGGAATTCAAACTCACTTGAATTCAGAAAAAGAGGTGACAGACACTGTAAAGAAACCACCGACAATGGCACCTAAAGGAATTAGTTTCATCAATTTTTCGAAATCATCTTCTCGAAAACAAGGAATGGTAACGCCAGACAAGGGAAATTCTGTTCAAATTGGGACCCTTTCTAATCAAAGTGCATCGGGCACGGCTTTAAACTTGATGAATCCTGGGAAAACGCCAGTGGGGGTACCTAAAGGAATTAATTTCCTTTCATTTGGAAAAGGTCGTATTTCCGGTTTCAAAAGTACTGTTTCCTCCTTTCTGAATAAGGAAAGTGGTATCAAGTTGTCTCAGAAAGGAAGTTTAGGTACGCCTGAACAAGCATCTCTAGAGAAGGATGATGGCAGTAAAATTGGCATTGGGCTGCAGACTGCTGTGTGCTCAAATGAGACTTTAAAGGAAAATCAATGTGTAGCGGGGAAAATGGATTTGGGTTTCCAAGGAAAAGCTTCAATACATCGTTATAGTAATGGTGTACAATTTAGCTCAACCTCTCATCAGGATCACAGTCTTAGTAGATCAGTGCAAGAGGGAGCTAAGGCATATACTCCTCAGACTTCAACTCTGACCTCATCTATGTTTCCAACTTCTCCATTTATTTCAGGTCAATCTTCAGAACGGTTAGCACCAGGACATCATAAGCACGTATATAACTCTGCTCAAAGGGCACTGTTATCAACTCTATCATTTGCAGCAGAGCACGAGTCCAATATTAAGCTAAAGTCCCCTTTTGGTGCATCAGCTGTGAAATTAGAGATGAACAAGGCTGTATAG 3276 0.402 MLNLGDPISTHLELKASYIEGEFNQNISKGFDGSFIANSSTSETKETSVPEISTSSTGHETQQKEMELVEPLCDAMVSLPIIEEGEFEKEERGQRVHVATHLSLDDGMEYNDPLNFSIELERLQKEMELVKPVSAAVVSFRTAEEGKYEKEEQRGQKACEAIQFSVDQGMNNEESNSTVKHEKQKKEMDSAKPACAAMVSLPTTKEGKLDKEEQHGQKASEAMHVSVDQAMNSEALISSINPNRQQKEMELVKPVSAAIISLPTTEEGEFKKEEQQGQRVPEAMQFSMDEGVNNEASNSHIKHEKQQKEMNSSKPVCAAIVSLPTTKEGELEKKVQDGQKVPEAMHISVDHGMDIESLILTTKPKSQHNPMELAKPGCAAIVSLPDIEEDELEKEEHNCSDGSKSTKTYVRKSKKRDLGLSDIEPSGRKVPEAMDLSVNQGINGETLNVGNYSEEMWFMDIDILDAKHEMRHEKEQPEKITCANGAIFSNHPDKKEGIEEGEISGDFRMDENSIDTSSADSLMIEQREHDVHKLQHVIENIVFPFNTQKEEKEKQYESTQDNSRLMQPRKSDKNGLPNGVDFGISREIVDYGDLVEHGSVSVTAKSEDGGIKGVVGLPPTLANKEVSPAEEATDDHQNTSAKAGISCKKKRGPVTEERKAKKKEKKRKKRAEKNRKLGVKRLKLQPVQKPKTITYCRHYLKGRCHEGDKCKFSHDIVPLTKSKPCCHFARHSCMKGDDCPFDHELSKYPCSNFVSKGSCSRGNACMFSHEMPTKQDVATSSNDSKAELEPKLLGNANLSKPPNISSSSASQQKQISDSKGIQTHLNSEKEVTDTVKKPPTMAPKGISFINFSKSSSRKQGMVTPDKGNSVQIGTLSNQSASGTALNLMNPGKTPVGVPKGINFLSFGKGRISGFKSTVSSFLNKESGIKLSQKGSLGTPEQASLEKDDGSKIGIGLQTAVCSNETLKENQCVAGKMDLGFQGKASIHRYSNGVQFSSTSHQDHSLSRSVQEGAKAYTPQTSTLTSSMFPTSPFISGQSSERLAPGHHKHVYNSAQRALLSTLSFAAEHESNIKLKSPFGASAVKLEMNKAV 1091
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1632g00007 1091 SUPERFAMILY CCCH zinc finger 748 774 IPR036855 GO:0046872
Pral1632g00007 1091 MobiDBLite consensus disorder prediction 798 822 - -
Pral1632g00007 1091 MobiDBLite consensus disorder prediction 38 62 - -
Pral1632g00007 1091 Gene3D - 721 785 - -
Pral1632g00007 1091 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEI 203 1081 IPR045124 GO:0003723|GO:0045892
Pral1632g00007 1091 FunFam C3H-type transcription factor 648 719 - -
Pral1632g00007 1091 MobiDBLite consensus disorder prediction 549 579 - -
Pral1632g00007 1091 MobiDBLite consensus disorder prediction 794 847 - -
Pral1632g00007 1091 MobiDBLite consensus disorder prediction 170 192 - -
Pral1632g00007 1091 MobiDBLite consensus disorder prediction 625 677 - -
Pral1632g00007 1091 ProSiteProfiles Zinc finger C3H1-type profile. 744 772 IPR000571 GO:0046872
Pral1632g00007 1091 Coils Coil 654 674 - -
Pral1632g00007 1091 SMART c3hfinal6 719 745 IPR000571 GO:0046872
Pral1632g00007 1091 SMART c3hfinal6 747 771 IPR000571 GO:0046872
Pral1632g00007 1091 SMART c3hfinal6 691 716 IPR000571 GO:0046872
Pral1632g00007 1091 ProSiteProfiles Zinc finger C3H1-type profile. 690 717 IPR000571 GO:0046872
Pral1632g00007 1091 MobiDBLite consensus disorder prediction 176 190 - -
Pral1632g00007 1091 Pfam CCCH-type zinc finger 696 715 IPR041367 -
Pral1632g00007 1091 SUPERFAMILY CCCH zinc finger 690 715 IPR036855 GO:0046872
Pral1632g00007 1091 Gene3D - 648 720 - -
Pral1632g00007 1091 MobiDBLite consensus disorder prediction 661 677 - -
Pral1632g00007 1091 ProSiteProfiles Zinc finger C3H1-type profile. 719 743 IPR000571 GO:0046872
Pral1632g00007 1091 MobiDBLite consensus disorder prediction 38 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1632g00007 Pral-Chr1632 33537 40004 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Pral1632g00007 zf-CCCH_4 2e-06 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1632g00007 - - pcin:129320444 1373.61