Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1632g00006 ATGCTGAATTTAGGAGATCCGATATCAACACATCTGGAACTGAAAGCCAGTTATATAGAAGGAGAATTTAATCAAAATATCTCCAAAGGCTTTGATGGATCTTTCATTGCTAACAGTTCAACATCTGAAACAAAGGAAACCTCCGTACCTGAAATTAGTACTTCAAGTACAGGGCATGAGACACAGCAAAAAGAAATGGAATTAGTGGAACCACTTTGTGATGCAATGGTTTCTCTGCCTATTATTGAAGAAGGTGAGTTTGAGAAGGAAGAACGTGGTCAAAGGGTTCATGTAGCAACACACCTTTCTCTAGATGATGGTATGGAATATAACGACCCGTTGAATTTTAGTATTGAGCTTGAGAGACTACAAAAGGAAATGGAATTGGTGAAACCTGTTTCTGCTGCAGTTGTTTCTTTTCGTACTGCTGAAGAGGGTAAGTATGAGAAGGAAGAACAACGTGGTCAAAAGGCATGTGAGGCTATTCAATTTTCTGTGGATCAGGGTATGAATAATGAAGAATCAAATTCAACTGTAAAGCATGAGAAACAAAAAAAGGAAATGGACTCAGCAAAACCAGCTTGTGCTGCAATGGTTTCTCTTCCTACTACCAAAGAGGGTAAGCTTGACAAGGAAGAACAACACGGTCAAAAGGCTTCTGAAGCAATGCATGTTTCTGTGGATCAGGCTATGAATAGTGAAGCATTGATTTCAAGTATAAATCCCAATAGACAACAAAAGGAAATGGAACTGGTGAAACCTGTTTCTGCTGCAATTATTTCTCTTCCTACTACTGAAGAGGGTGAGTTTAAGAAGGAAGAACAACAGGGACAAAGGGTTCCTGAAGCAATGCAATTTTCTATGGATGAGGGTGTGAATAATGAAGCATCAAATTCACATATAAAGCATGAGAAACAGCAAAAGGAAATGAACTCATCAAAACCAGTTTGTGCTGCAATTGTTTCTCTTCCTACTACCAAAGAGGGTGAGCTTGAGAAGAAAGTACAAGATGGTCAGAAGGTTCCTGAAGCAATGCACATATCTGTAGATCATGGCATGGATATTGAATCATTGATTTTAACAACAAAGCCTAAAAGCCAACATAATCCAATGGAATTGGCGAAACCTGGCTGTGCTGCAATCGTTTCCCTTCCTGATATTGAAGAGGATGAACTTGAGAAGGAAGAACATAATTGTAGTGATGGTTCCAAATCCACTAAGACGTATGTAAGGAAGAGTAAGAAGAGGGATTTGGGCCTCTCGGACATAGAGCCATCAGGTAGAAAGGTCCCTGAAGCAATGGACTTATCTGTTAATCAGGGTATCAACGGTGAAACATTGAATGTGGGCAACTATAGCGAAGAGATGTGGTTCATGGACATTGATATTTTGGATGCTAAACATGAAATGCGGCATGAAAAAGAGCAGCCAGAAAAAATAACTTGTGCAAATGGTGCAATATTTTCCAATCATCCAGATAAGAAAGAAGGCATTGAAGAGGGAGAAATTTCAGGTGACTTTAGAATGGATGAGAATTCAATTGATACGTCTTCTGCAGATTCCTTGATGATAGAACAGAGGGAACATGATGTACACAAGCTCCAACATGTTATTGAAAATATAGTATTTCCTTTTAACACACAGAAAGAAGAAAAAGAAAAACAATATGAATCAACTCAAGATAACAGTAGACTAATGCAACCTAGGAAAAGTGATAAAAATGGGCTTCCAAATGGAGTTGACTTTGGAATCTCTCGGGAAATTGTTGATTATGGGGATTTAGTGGAGCATGGTTCTGTATCGGTTACTGCAAAAAGTGAAGACGGGGGAATTAAAGGTGTTGTTGGCTTGCCACCCACTTTGGCTAACAAAGAAGTCTCGCCCGCAGAAGAAGCCACTGATGATCATCAAAACACATCTGCACAGAAAGCTGGCATCAGTTGTAAGAAAAAGCGTGGTCCTGTTACTGAGGAAAGGAAGGCCAAAAAGAAGGAAAAGAAAAGAAAGAAGCGGGCAGAAAAGAACAGAAAACTTGGGGTTAAAAGGTTGAAGCTGCAGCCAGTACAGAAACCAAAAACTATCACATATTGCCGCCATTATCTGAAGGGAAGGTGCCATGAGGGTGACAAGTGCAAGTTCTCACATGACATAGTGCCTCTGACAAAATCGAAGCCGTGCTGTCACTTTGCTCGTCACTCTTGCATGAAAGGTGATGACTGTCCATTTGATCATGAGCTTTCCAAGTATCCTTGTAGCAATTTTGTGAGTAAAGGATCTTGCAGCAGAGGGAATGCTTGTATGTTTTCACACGAGATGCCAACCAAACAAGATGTTGCTACATCTTCAAATGATAGCAAAGCTGAGTTGGAGCCTAAACTATTAGGAAATGCAAACTTAAGCAAGCCGCCTAATATCAGCAGCAGCAGTGCTTCTCAGCAAAAACAGATCTCTGATTCAAAAGGAATTCAAACTCACTTGAATTCAGAAAAAGAGGTGACAGACACTGTAAAGAAACCACCGACAATGGCACCTAAAGGAATTAGTTTCATCAATTTTTCGAAATCATCTTCTCGAAAACAAGGAATGGTAACGCCAGACAAGGGAAATTCTGTTCAAATTGGGACCCTTTCTAATCAAAGTGCATCGGGCACGGCTTTAAACTTGATGAATCCTGGGAAAACGCCAGTGGGGGTACCTAAAGGAATTAATTTCCTTTCATTTGGAAAAGGTCGTATTTCCGGTTTCAAAAGTACTGTTTCCTCCTTTCTGAATAAGGAAAGTGGTATCAAGTTGTCTCAGAAAGGAAGTTTAGGTACGCCTGAACAAGCATCTCTAGAGAAGGATGATGGCAGTAAAATTGGCATTGGGCTGCAGACTGCTGTGTGCTCAAATGAGACTTTAAAGGAAAATCAATGTGTAGCGGGGAAAATGGATTTGGGTTTCCAAGGAAAAGCTTCAATACATCGTTATAGTAATGGTGTACAATTTAGCTCAACCTCTCATCAGGATCACAGTCTTAGTAGATCAGTGCAAGAGGGAGCTAAGGCATATACTCCTCAGACTTCAACTCTGACCTCATCTATGTTTCCAACTTCTCCATTTATTTCAGGTCAATCTTCAGAACGGTTAGCACCAGGACATCATAAGCACGTATATAACTCTGCTCAAAGGGCACTGTTATCAACTCTATCATTTGCAGCAGAGCACGAGTCCAATATTAAGCTAAAGTCCCCTTTTGGTGCATCAGCTGTGAAATTAGAGATGAACAAGGCTGTATAG 3279 0.4023 MLNLGDPISTHLELKASYIEGEFNQNISKGFDGSFIANSSTSETKETSVPEISTSSTGHETQQKEMELVEPLCDAMVSLPIIEEGEFEKEERGQRVHVATHLSLDDGMEYNDPLNFSIELERLQKEMELVKPVSAAVVSFRTAEEGKYEKEEQRGQKACEAIQFSVDQGMNNEESNSTVKHEKQKKEMDSAKPACAAMVSLPTTKEGKLDKEEQHGQKASEAMHVSVDQAMNSEALISSINPNRQQKEMELVKPVSAAIISLPTTEEGEFKKEEQQGQRVPEAMQFSMDEGVNNEASNSHIKHEKQQKEMNSSKPVCAAIVSLPTTKEGELEKKVQDGQKVPEAMHISVDHGMDIESLILTTKPKSQHNPMELAKPGCAAIVSLPDIEEDELEKEEHNCSDGSKSTKTYVRKSKKRDLGLSDIEPSGRKVPEAMDLSVNQGINGETLNVGNYSEEMWFMDIDILDAKHEMRHEKEQPEKITCANGAIFSNHPDKKEGIEEGEISGDFRMDENSIDTSSADSLMIEQREHDVHKLQHVIENIVFPFNTQKEEKEKQYESTQDNSRLMQPRKSDKNGLPNGVDFGISREIVDYGDLVEHGSVSVTAKSEDGGIKGVVGLPPTLANKEVSPAEEATDDHQNTSAQKAGISCKKKRGPVTEERKAKKKEKKRKKRAEKNRKLGVKRLKLQPVQKPKTITYCRHYLKGRCHEGDKCKFSHDIVPLTKSKPCCHFARHSCMKGDDCPFDHELSKYPCSNFVSKGSCSRGNACMFSHEMPTKQDVATSSNDSKAELEPKLLGNANLSKPPNISSSSASQQKQISDSKGIQTHLNSEKEVTDTVKKPPTMAPKGISFINFSKSSSRKQGMVTPDKGNSVQIGTLSNQSASGTALNLMNPGKTPVGVPKGINFLSFGKGRISGFKSTVSSFLNKESGIKLSQKGSLGTPEQASLEKDDGSKIGIGLQTAVCSNETLKENQCVAGKMDLGFQGKASIHRYSNGVQFSSTSHQDHSLSRSVQEGAKAYTPQTSTLTSSMFPTSPFISGQSSERLAPGHHKHVYNSAQRALLSTLSFAAEHESNIKLKSPFGASAVKLEMNKAV 1092
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1632g00006 1092 MobiDBLite consensus disorder prediction 38 62 - -
Pral1632g00006 1092 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEI 310 1082 IPR045124 GO:0003723|GO:0045892
Pral1632g00006 1092 SUPERFAMILY CCCH zinc finger 691 716 IPR036855 GO:0046872
Pral1632g00006 1092 MobiDBLite consensus disorder prediction 799 823 - -
Pral1632g00006 1092 MobiDBLite consensus disorder prediction 170 192 - -
Pral1632g00006 1092 MobiDBLite consensus disorder prediction 662 678 - -
Pral1632g00006 1092 SUPERFAMILY CCCH zinc finger 749 775 IPR036855 GO:0046872
Pral1632g00006 1092 ProSiteProfiles Zinc finger C3H1-type profile. 745 773 IPR000571 GO:0046872
Pral1632g00006 1092 MobiDBLite consensus disorder prediction 795 848 - -
Pral1632g00006 1092 MobiDBLite consensus disorder prediction 176 190 - -
Pral1632g00006 1092 Pfam CCCH-type zinc finger 697 716 IPR041367 -
Pral1632g00006 1092 MobiDBLite consensus disorder prediction 625 678 - -
Pral1632g00006 1092 Coils Coil 655 675 - -
Pral1632g00006 1092 Gene3D - 722 786 - -
Pral1632g00006 1092 ProSiteProfiles Zinc finger C3H1-type profile. 691 718 IPR000571 GO:0046872
Pral1632g00006 1092 Gene3D - 643 721 - -
Pral1632g00006 1092 SMART c3hfinal6 720 746 IPR000571 GO:0046872
Pral1632g00006 1092 SMART c3hfinal6 692 717 IPR000571 GO:0046872
Pral1632g00006 1092 SMART c3hfinal6 748 772 IPR000571 GO:0046872
Pral1632g00006 1092 ProSiteProfiles Zinc finger C3H1-type profile. 720 744 IPR000571 GO:0046872
Pral1632g00006 1092 FunFam C3H-type transcription factor 649 720 - -
Pral1632g00006 1092 MobiDBLite consensus disorder prediction 38 63 - -
Pral1632g00006 1092 MobiDBLite consensus disorder prediction 549 580 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1632g00006 Pral-Chr1632 33537 40004 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Pral1632g00006 zf-CCCH_4 2e-06 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1632g00006 - - pcin:129320444 1374.38