Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1628g00008 ATGATCTACTCGCGAAATTTTACATTGAAATTCACTCTTCAACGGCCTCCCCCTGATTTTCTACTTAGGTCATCGGAAAACCTAGTCGGGTCTATATCTCAAATCCCTAGACTATACAGAGCTGAAAGAGCAGTTCCGCCTGCCCGTTGTGAAGATCTTGAAGCGGCTGTGAATGCTGCCGGTCTCACCAGCAAGCAGGCCCTAAAAGAAGCAAAAGTTGCTTTGCTGGAGTATCTGCATGCTACTAGAAGCATCCAGTACTTGGATGCGGATCATATGAGTAGAAACTCGCCTTACTTTCTTGAGGGGCTTCTGAAGAAAGTAGTCATAGCGGGGAACATTGGGCGATCAGTTTCCAGGTATTTGCGTTATCATCCCATCAATGAATTTGAGCCCTTCTTCGAAAGCATCGGTCTAACACCCTCTGAATATCCATCTATTTTACCCAAAAATATGATGTTTTTGAGTGACGATCAACTGTTACTGGAGAACTATTACGCTCTTTGTAACTATGGGATTCCTCGTAATAAGATAGGAAAGATATATATGGAAGCAGCTGAAGTGTTTCGATATGATTATGGGGTTTTACCGTCAAAGCTTCGAGCTTATGAAAGATTGGGTCTTGGCCAGCCTACTCTGCTAAAAGTCATTGCTTCTAGCCCATACCTTCTGACTGGAGATTGTAACCCTGATTTTGTTAAGGTTATTGAGAAGTTTAGGCATTATGTTAAGGATATTAACTGGATTGAGGGACATTTATTGGATGACACTTCTTGTAATTGGAGCCAGATGCTCAGGCTCCTGTGCTTTTTGGGCAGGGTTTTGACTGAGCAACAGTTATCTGACATAATCAACCTGCACCCTGACTTTCTCTTTGAGGGATCGGGAGGTAGTAGCACACTCTCCCTTATTGTCTTCCTGCTAAAATTTGGATTGTCTGTGGATCAAATATCCTTCATATTTATAAATTTTCCACCGATAAGAGTGAGCAAATTCCTTTCAAACTTGAGGCATTGTTTTCTATTCTTAAGTGAACTTGAAATGGAGGCTGCAGAGATTGGGAAGATTTTCCGTTCTCACTCCTTAATGTTGGGTTCATTCACTTTGAAGAAAACCAATAGTTTACTTTCTAACTTGAATGTTGGGAAGAAGCGACTTCGGATGTTCGTACAGGATAATCCGTTAGAATTGAAGAATTGGGAATTGGGAAGAAGAGTCAAGCCTTTGCCGGGCACCGACGAAGAGAAAATATCCCGGTTGCGGAAGACAGAGTTCTTGTTGAGATTGGGATATGATGCGGACTCTAAAGAGATGAAAGATGCATTTAAATTGTTTAGAGGTAAGGGAGCAGAACTCCAGGAGAGGTTCAACTGTATTGTTCAAGCTGGCTTGGATCCTCAAGACGTGCAGGAAATGCTCAAAGTTGCCCCTCAGATTCTTAACCTCAGAACAGATGTAATCAACCAGAAAATTGACTATCTTGTAAATGAACTAAGACATCCCGTATCAACTTTAGTCAACTTCCCATCTTATCTTTCCTACAGTACTGAAAGAGTCCGGCTTAGGTTCTCAGTCTATAAGTGGCTTGTAGACCAAGGATGTGCTGATCCCAATATTTCTTTGAGAGCTGTAATTTCATGCAGAGAGGACATGTTCATACAATGTTATGTAAATCGCCATCCAAGTGGCCCTAAATTTTGGCAGGATTTGAAGAATGAAATTTATTGTCAGAACTAG 1737 0.4151 MIYSRNFTLKFTLQRPPPDFLLRSSENLVGSISQIPRLYRAERAVPPARCEDLEAAVNAAGLTSKQALKEAKVALLEYLHATRSIQYLDADHMSRNSPYFLEGLLKKVVIAGNIGRSVSRYLRYHPINEFEPFFESIGLTPSEYPSILPKNMMFLSDDQLLLENYYALCNYGIPRNKIGKIYMEAAEVFRYDYGVLPSKLRAYERLGLGQPTLLKVIASSPYLLTGDCNPDFVKVIEKFRHYVKDINWIEGHLLDDTSCNWSQMLRLLCFLGRVLTEQQLSDIINLHPDFLFEGSGGSSTLSLIVFLLKFGLSVDQISFIFINFPPIRVSKFLSNLRHCFLFLSELEMEAAEIGKIFRSHSLMLGSFTLKKTNSLLSNLNVGKKRLRMFVQDNPLELKNWELGRRVKPLPGTDEEKISRLRKTEFLLRLGYDADSKEMKDAFKLFRGKGAELQERFNCIVQAGLDPQDVQEMLKVAPQILNLRTDVINQKIDYLVNELRHPVSTLVNFPSYLSYSTERVRLRFSVYKWLVDQGCADPNISLRAVISCREDMFIQCYVNRHPSGPKFWQDLKNEIYCQN 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1628g00008 578 PANTHER CGI-12 PROTEIN-RELATED 259 560 IPR003690 GO:0003690|GO:0006355
Pral1628g00008 578 Gene3D Transcription termination factor 3, mitochondrial 119 292 IPR038538 -
Pral1628g00008 578 Gene3D Transcription termination factor 3, mitochondrial 298 564 IPR038538 -
Pral1628g00008 578 SMART mt_12 400 432 IPR003690 GO:0003690|GO:0006355
Pral1628g00008 578 SMART mt_12 179 209 IPR003690 GO:0003690|GO:0006355
Pral1628g00008 578 SMART mt_12 318 349 IPR003690 GO:0003690|GO:0006355
Pral1628g00008 578 SMART mt_12 502 535 IPR003690 GO:0003690|GO:0006355
Pral1628g00008 578 SMART mt_12 470 501 IPR003690 GO:0003690|GO:0006355
Pral1628g00008 578 FunFam mTERF family protein 107 257 - -
Pral1628g00008 578 Pfam mTERF 422 552 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1628g00008 Pral-Chr1628 37462 39198 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Pral1628g00008 mTERF 1.5e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1628g00008 - - pcin:129300550 913.294