Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1628g00006 ATGAACGAGAACAGAGTTGACTGGCAAGGGCAGATACAACAGAGGCGGGGACTAAGTGGGGATTTCAATTATGAATCTAGTCATCGTTCTCATCAATGTTTTGATGTCAAACAGGCTTGGAATATTGGTGTTGGAGGAGCTGAAGAGTCACCACACATGGGCTCTGCAAAATCATCAACCACCATTATGGGCGGTTTTGAATCCCCCGCTTCTGCTTTTTATGCAGCAGAACGATGCATGGGGTTTCCGCAATATCATTCCCAAGCGAACATAAATAATCCCTCTTTTGGCTCTCCATTTTCTAAGATTCACGATTTGGAACTCCCTTTGTATCAATCTCCCAGGGAAAACACTTTCTTGGATCATTCGCCACACCAAGTTAACTTCAATGTCGAATCATCTAACCCCTTGCAAGCAGTGGCTAGATCCCAAGTAGACCCAGAAAGACCCAATAAAACTCCATGTGGACGTTTGCCAACCGACAAGTTTCTTCCAACTGAACAACACAAATTGTTCATTGATGTTGATTATGCCTCAGTCAGGGGAAACCATACGGTTGGTTGTGGGTCATACAATTTACCTCTTTCTCATGTAAGCTTCTCCTCACAGCAAGAGAAGCTGTGTCCAACGGTTTCGGCAGCAAGTGTTACAATTAATGGAAATCCTACTTCTAATGGTGGGGCAGTAATCCCAAGTAAATCACGTATAAGGTGGACTCAGGATCTTCACGAGAAGTTTGTTGAATGTGTGAATCGCCTTGGGGGCTCTGAGAAGGCTACACCAAAAGCCATATTAAAGCTGATGAACACAGATGGGCTGACCATCTTCCATGTAAAGAGTCACTTGCAGAAATGTAGAATTGCAAAATACATGCCAGATCCAGCTCAAGGGAAGTCTGACAAAAAAGCCCATATAGACGATGTGCATCAAATTGATGTTAAAACTGGCTCGCAAATCAGAGAGGCGCTTCAGCTACAGCTAGATGTTCAGAGGCGTCTCCATGAACAGCTAGAGATTCAGAGAAGATTACAGCTTCGAATTGAAGAGCAAGGAAAGCAGCTGAAGATGATGTTTGACCAGCAGCAGAAAACATGTAATAGCTTCTCGAATCTGGGCAGTACAGAAAATGATGATCCATCAGTTAGTCATAAAGAGGTTGAGGTTTCAATTGCCGAGGGGTCTGGAAATTCCTCCTTCCCTTCCAAGATATGTTAG 1215 0.4379 MNENRVDWQGQIQQRRGLSGDFNYESSHRSHQCFDVKQAWNIGVGGAEESPHMGSAKSSTTIMGGFESPASAFYAAERCMGFPQYHSQANINNPSFGSPFSKIHDLELPLYQSPRENTFLDHSPHQVNFNVESSNPLQAVARSQVDPERPNKTPCGRLPTDKFLPTEQHKLFIDVDYASVRGNHTVGCGSYNLPLSHVSFSSQQEKLCPTVSAASVTINGNPTSNGGAVIPSKSRIRWTQDLHEKFVECVNRLGGSEKATPKAILKLMNTDGLTIFHVKSHLQKCRIAKYMPDPAQGKSDKKAHIDDVHQIDVKTGSQIREALQLQLDVQRRLHEQLEIQRRLQLRIEEQGKQLKMMFDQQQKTCNSFSNLGSTENDDPSVSHKEVEVSIAEGSGNSSFPSKIC 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1628g00006 404 FunFam Myb family transcription factor 232 290 - -
Pral1628g00006 404 Coils Coil 320 340 - -
Pral1628g00006 404 SUPERFAMILY Homeodomain-like 231 287 IPR009057 -
Pral1628g00006 404 Gene3D - 232 291 - -
Pral1628g00006 404 Pfam Myb-like DNA-binding domain 237 285 IPR001005 -
Pral1628g00006 404 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 226 380 IPR044848 GO:0003700
Pral1628g00006 404 MobiDBLite consensus disorder prediction 141 160 - -
Pral1628g00006 404 NCBIfam myb-like DNA-binding domain, SHAQKYF class 233 288 IPR006447 GO:0003677
Pral1628g00006 404 Pfam MYB-CC type transfactor, LHEQLE motif 318 364 IPR025756 -
Pral1628g00006 404 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 230 290 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1628g00006 Pral-Chr1628 28783 32254 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1628g00006 221 363 G2-like Transcription Factor Family AT3G04450 54.422 9.32e-49 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pral1628g00006 Myb_DNA-binding 6.1e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1628g00006 - - ccaj:109797364 460.299