Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1624g00001 CGTGCCTTGCTAGGGAAGCAGATGATATCGTTTAAGAAATTGGCCAAAAAGGTGAAGGCTGTTGGTGGGGTTGACCCAGATCCTGTCTACCATGAGTATTTGCTCAGGGGACAGGAGGAAGAAACCGCAAATAACAGAACCCCGACTGGCTTTTTTGCACTCTACGTGGGGGAGGAGCGCAAACGACATGTCGTTCCAACCAGCTATCTCTCTCACCCACTGTTCAAGATGTTGCTGGACAAGGCATACGACGAATACGGGTTTGATCAGAAGAACGGCCTGGTTGTTCCGTGCAGTGTTTCAACGTTTCGGCAGGTGTTGAATGCAATAGAATGCAGCAATGGGAGGTTTGATCTGGCCAAAATTTTTGATGAGTTTCCTTGA 384 0.4844 RALLGKQMISFKKLAKKVKAVGGVDPDPVYHEYLLRGQEEETANNRTPTGFFALYVGEERKRHVVPTSYLSHPLFKMLLDKAYDEYGFDQKNGLVVPCSVSTFRQVLNAIECSNGRFDLAKIFDEFP 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1624g00001 127 Pfam Auxin responsive protein 38 109 IPR003676 GO:0009733
Pral1624g00001 127 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 36 106 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1624g00001 Pral-Chr1624 2520 2903 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1624g00001 48 111 Calmodulin-binding Proteins AT3G43120 53.125 3.34e-21 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1624g00001 K14488 - gmx:100776885 178.333