Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1622g00008 ATGATGCTAATAACTATGGATGGCTGTTACTTGATTGATAGAAGTTTCAATTTTCGAAGGGTGCAAATGAGGTTTCCTTGCAGAGGCTCAAATGATGGTTTGGCTGAGAAGACCCACCACTACACGTTACTTGATGGGGAGATGATCATTGATACGTTGCCTGATTCACAGAAACAGGAGAGGAGATATCTTATATATGATATGATAGCAATTAACCATGTACCAGTAATAGAGCGACCGTTCTATGAACGGTGGAAGATGCTTGAGAAAGAGGTGATTGAACCTAGAAACCAGGAACGGCATAATACATACCAGAGTAGAAATCCTTATTATAGATATGACCTGGAACCATTCAGGGTGAGGAGGAAAGATTTTTGGTTGCTCTCTACTGTCACAAAGCTTTTAAATGAATTCATTAAGAAACTCTCACATGATGCAGATGGCCTCATATTTCAGGGTTGGGATGATCCTTATGTACCCCGCACTCATGAAGGCCTCCTGAAGTGGAAATATCCTGAGATGAATTCAGTAGATTTTCTCTTTGAGATTGATGATGATCGCCAGTCACTGTTCCTTAATGAACGAGGAAAGAAGAGACTCATGGAAGGGAGTAGAGTTGCATTCAGAGATGGTTCAGATCCCTTGCTTTATTCGGGGAAGATTATAGAGTGTTCTTGGGATTTAAATGAACAGGAATGGGTATACATGCGAACCAGGACAGATAAATCAACTCCAAATGATGTTAATACTTACAAGAAGGTTATGCGGAGCATAAAAGACAACATCACACAGGATATCTTGTTGAATGAAATTTACGAGATAATTCGCCTTCCGATGTATGCTGACAGGATAAAAAATGACAGCAAAGCCCACCACCATTTTGGTGCAGCACGCCGGAGGTGA 903 0.4086 MMLITMDGCYLIDRSFNFRRVQMRFPCRGSNDGLAEKTHHYTLLDGEMIIDTLPDSQKQERRYLIYDMIAINHVPVIERPFYERWKMLEKEVIEPRNQERHNTYQSRNPYYRYDLEPFRVRRKDFWLLSTVTKLLNEFIKKLSHDADGLIFQGWDDPYVPRTHEGLLKWKYPEMNSVDFLFEIDDDRQSLFLNERGKKRLMEGSRVAFRDGSDPLLYSGKIIECSWDLNEQEWVYMRTRTDKSTPNDVNTYKKVMRSIKDNITQDILLNEIYEIIRLPMYADRIKNDSKAHHHFGAARRR 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1622g00008 300 CDD Adenylation_mRNA_capping 1 171 IPR001339 GO:0004484|GO:0005524|GO:0006370
Pral1622g00008 300 Gene3D DNA ligase/mRNA capping enzyme 1 170 - -
Pral1622g00008 300 SUPERFAMILY Nucleic acid-binding proteins 173 286 IPR012340 -
Pral1622g00008 300 Pfam mRNA capping enzyme, catalytic domain 1 170 IPR001339 GO:0004484|GO:0005524|GO:0006370
Pral1622g00008 300 SUPERFAMILY DNA ligase/mRNA capping enzyme, catalytic domain 7 171 - -
Pral1622g00008 300 Gene3D - 171 262 IPR012340 -
Pral1622g00008 300 PANTHER MRNA-CAPPING ENZYME 1 282 - -
Pral1622g00008 300 FunFam mRNA capping enzyme family protein 169 277 - -
Pral1622g00008 300 Pfam mRNA capping enzyme, C-terminal domain 175 267 IPR013846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1622g00008 Pral-Chr1622 77833 81640 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1622g00008 1 300 Protein tyrosine phosphatase (PTP) family AT3G09100 72.425 3.57e-154 444
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1622g00008 K13917 - qsa:O6P43_016658 552.747