Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1621g00003 ATGTGGAGATTCAAGCCATTCATGCAAAAAGAGCCAGCTGGGCTTGAAGGCCGTTCTATTGATGTTGGTAATCTTAAAGTAAATGTCCTGAAGGCGATTGCTGAGGGAGGGTTCTCTTGTGTCTACTTGGCTCGTGATGCTGTAAACATGTCAAAACAATATGCTTTGAAGCACATGATATGCAATGATGAAGAATCACTTGAATTAGTAAAGAAGGAGATCTCAGTCATGAAGTCATTGAAAGGGCATCCCAATGTTGTCACACTTTATGCTCATGCAATCTTTGATATGGGTAGGACAAAAGAGGCTTTCCTTGTTATGGAATTTTGTGATAAGTCTCTAGTTAGTGTGCTGGAGAGCCGAGGAGCTGGTTATTTTGATGAGAAGCAAGTTCTTCTAATCTTCAGGGATGTATGTAACGCAGTTTTTGCTATGCACTGCCAATCCCCACCTATTGCTCACCGGGACTTGAAAGCTGAGAATCTTTTGTTTGGCCCAGATGGTTTATGGAAATTATGTGATTTCGGGAGTACTTCCACCAACCACAAGCGTTTTGAGAAACCAGAAGAAATGGGGATTGAGGAAGACAATATCAGGAAGCACACAACTCCTGCCTATAGGGCCCCTGAGATGTGGGATCTGTTCCTGAGAGAAGTCATCAATGAGAAAGTGGATATATGGGCATTGGGGTGTCTCCTTTTCCGTATATGCTACTTCAAAAGTGCATTTGATGGTGAATCAAAGTTGCAAGTCTTAAATGGAAACTACCGCATTCCTGATTTGCCAAAATACAGTTCATCCCTTACGGACCTAATCAGAGATATGCTTCAGGCCAGACCAGACGACAGACCAGATATCACGCAGGTCTGGTTTCGTGTCAATGAGCAGTTACCTATTGATCTGCAGAAGTCATTACCTGAGAGACCACCTGAATTGCTATCTTCCAACAATCATGAAGGTTCTGCAAAGCCTGCAACTCAATCATTGCCAATGCCTCGTCGGAGTCCACCTCCTCCACCTTCATCTGGAGAAACTAAAAGTTCATCGCAGTCATCCCATTCTTCTAGGGGAGGGGGAAGTGGAGGGCAGCTTGGCGCATTCTGGTCTACTATGCATGCAAAGGACTCATCTGCCTCGGAGGTTAAGAGCAGACCAATGTTTGATGAAAGAACCATCTGGCGATCATGCAAGAGATCCAGGATCTCAAGCAAACCTTGCAGCAGCAAGAACTCCATCGCCAAAGAAAGAGGGTCTGAGAGCCTCTCCTACAGTCCATCATCTGCGGCTACGGAGAAGGTTAGCGGGACGATGTGGGAACTCCCACAAAACAAAACTGAAATGAAAAGTCCCAGTTCAGAACCGAAGGCATGGCAAGCTTTTCCAGAGGACCCCAGCAACAAAAGTCCTGCTTCTGCGGACAATAATAGAGCCAAATCTGTGAGGACAAGAAAAATGCATCAAACACGAGCAACCAATCAACCACATTCAGATTTTGATACATGGGGTTTTGAAACAGATGGTTTCGCTTCTGTATCTGCTGCTGGAAGCTCAGATGCCCAGACCCCTAGCACAGAAGGGAGTAATCCTCAGGCTTTTGGTAATGCCAAGACATACGAGGGCAAGTCAACTTCCCAACCTGCCGGGTGGGCTGGAAAAGGAAGATGGCATCAGAAGGAGCCTTTGGATAGAAAAAGGCACACAAGGATTGGTTGTTATTCAGAAGTGAGTTTGGCCACAATAGCTGACCTTGACATGACAGCCAAACAAAAAAGAGATGCTGCGTCAAATGCATGGAAAGCTTTGGCCACTGAAGAGAAGATGAGGGGCAAATCAGAGGAAATAGGAGCAGAAGATGTTGAGCAACTACTAGGAATCCGTCACGGTGGGGAGGAGGTGAAAACTAAAGTTGATGTCGGTGATGCTATGTATCAGGAGTTGAGAAATGAATATCGGAAAGTGTCATTCAGCAAAATACTAAAAGACATTGTTTCAGGGGAGAAGGATTATAGATTCGAGTTTTTATTTGTGCTGCACACCCTGGGTACTTTTCTATGTCTGAAATCAAGCTCAGAAGCGAGTGAGAAGTTGGTTAGAGTCATGCGCTGCACAATGGATGACTTTGGAAAGTATGATTGGGCTATCTACATTATAAAGGACCTCTGGAAAGAAATGGGAGACTATGTCAAGGCTTATTTTTTTGTGAGCATTTTAACCTCAACACGCCAGCCAGTTGGTCGAGAGTCTACTACTGCAATTGAATACTGGATTGATGAGAAGATAAAAGAATTGGCTAGCAAGGAGATTATGTATGGAGGAAAAGGCAGTGAAGAGCTGAAGAAGTTACATGAGCGCCTAATGAAGAGGATAGAGGAAGGGCAAAGGTGCTAA 2388 0.446 MWRFKPFMQKEPAGLEGRSIDVGNLKVNVLKAIAEGGFSCVYLARDAVNMSKQYALKHMICNDEESLELVKKEISVMKSLKGHPNVVTLYAHAIFDMGRTKEAFLVMEFCDKSLVSVLESRGAGYFDEKQVLLIFRDVCNAVFAMHCQSPPIAHRDLKAENLLFGPDGLWKLCDFGSTSTNHKRFEKPEEMGIEEDNIRKHTTPAYRAPEMWDLFLREVINEKVDIWALGCLLFRICYFKSAFDGESKLQVLNGNYRIPDLPKYSSSLTDLIRDMLQARPDDRPDITQVWFRVNEQLPIDLQKSLPERPPELLSSNNHEGSAKPATQSLPMPRRSPPPPPSSGETKSSSQSSHSSRGGGSGGQLGAFWSTMHAKDSSASEVKSRPMFDERTIWRSCKRSRISSKPCSSKNSIAKERGSESLSYSPSSAATEKVSGTMWELPQNKTEMKSPSSEPKAWQAFPEEXPSNKSPASADNNRAKSVRTRKMHQTRATNQPHSDFDTWGFETDGFASVSAAGSSXDAQTPSTEGSNPQAFGNAKTYEGKSTSQPAGWAGKGRWHQKEPLDRKRHTRIGCYSEVSLATIADLDMTAKQKRDAASNAWKALATEEKMRGKSEEIGAEDVEQLLGIRHGGEEVKTKVDVGDAMYQELRNEYRKVSFSKILKDIVSGEKDYRFEFLFVLHTLGTFLCLKSSSEASEKLVRVMRCTMDDFGKYDWAIYIIKDLWKEMGDYVKAYFFVSILTSTRQPVGRESTTAIEYWIDEKIKELASKEIMYGGKGSEELKKLHERLMKRIEEGQRC 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1621g00003 797 Pfam Protein kinase domain 29 289 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1621g00003 797 SUPERFAMILY Protein kinase-like (PK-like) 28 342 IPR011009 -
Pral1621g00003 797 MobiDBLite consensus disorder prediction 301 371 - -
Pral1621g00003 797 MobiDBLite consensus disorder prediction 401 564 - -
Pral1621g00003 797 Gene3D Transferase(Phosphotransferase) domain 1 11 306 - -
Pral1621g00003 797 SMART serkin_6 27 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1621g00003 797 FunFam probable serine/threonine-protein kinase DDB_G0280111 10 305 - -
Pral1621g00003 797 ProSiteProfiles Protein kinase domain profile. 27 297 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1621g00003 797 CDD STKc_GAK_like 26 298 - -
Pral1621g00003 797 MobiDBLite consensus disorder prediction 309 324 - -
Pral1621g00003 797 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Pral1621g00003 797 PANTHER SERINE/THREONINE PROTEIN KINASE 1 399 - -
Pral1621g00003 797 MobiDBLite consensus disorder prediction 344 359 - -
Pral1621g00003 797 MobiDBLite consensus disorder prediction 401 452 - -
Pral1621g00003 797 MobiDBLite consensus disorder prediction 511 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1621g00003 Pral-Chr1621 28412 38517 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1621g00003 31 292 CBL-interacting serine-threonine protein kinases AT4G18700 29.137 1.13e-19 91.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NAK Pral1621g00003 Pkinase 6.1e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1621g00003 K08853 - gmx:100808507 647.121