Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1618g00010 ATGTTGGAGGATGGAAGGCTGGTAGTGCTGTTCATCAGCATCTGTGTTCTGGGTTTAATCCCCATTGCCATCAATGGCGACACGGATCCAAGTGATGCTGCTGCTCTAAGGGTAATGTTTGGCAGCATGAATTCACCATCCCAGCTAGGTTGGCCTGCAAGTGGTGATGATGCATGTGGACAGCACTGGAAGGGCATTAGTTGCTCAGGCAACCGAGTCACAGAGATCAAGTTACCTGGCCTTGGACTAACGGGAACACTAGGCTACCAGTTACAAACCTTGACATCTGTGATCAACCTGGACATGAGTAATAATAATCTTGGAGGCACCATACCATATCAACTTCCTCCAAATGTGCAGCGATTAAACCTTGCTAACAACAACTTCACTGGGGAAGTAGCTTATTCTATTTCTGATATGACTTCTCTTACATACCTAAATCTTGGTCACAATCAACTCCAGGGCGCACTGAGTGTCAACTTTCAAAAGCTTTCTTCACTCTCCACATTGGATCTCTCTTTCAATTCTCTGTCAGGTGACCTTCCTCAGAGTTGCACCTCACTTTCAAGCATCACCACCATGTATTTGCAAAATAACCAGTTTACAGGCACCATTGATATCCTTGCTGGTCTGCCTCTTCAAAATCTGAATGTGCAAAACAATCATTTTACAGGTTGGATACCAGATCAATTGAAAAACATAAACCTACAGAAGGATGGCAATGCATGGAGCTCAGGCCCTGCACCCCCACCCCCACCTGGGACACCTCCTGCGACTAGCAGCACACGGACTCACAAAACTGGTGGGGGCAGTGGAAGAAACACCCCATCAAATGCTGATACCAGTGACAACGATAAAAAATCTGGTATAGGAGGTGGTGGCATTGCAGGAATAGTGATCTCCATTTTAATTGTTGGAGCAATAGTAGCATTCTTTCTGATGAAGAGGAGATCCAGGAAGCCATCTGCAGATATAGAAAATGTTGACAATCAGCCTTTTGCTCCTCTTGCATCAAATGAAGTGCATGAATTGAAGTCAGTGCAAACATCCTCTATACCTGACACAAAGACTTTTGTTCCTTCTGCCTCATTCAATCTCAAACCTCCACCTATTGATCGTCACAAATCATTTGATGAAGATGAATTTTCAAAGAAGCCCGATATTGTAAAGAAAACTGTAACAGCTCCTGCAAATGTAACATTATATTCTGTAGCAGATCTACAGATTGCTACTGGCAGCTTCAGTATGGATCACCTTCTTGGTGAGGGATCTTTTGGGCGTGTTTACCGTGCTCAATTTGATGGTGGAGAGGTTCTTGCCGTGAAGAAGATAGATTCATCTGTCCTTCCTAATGATATGTCTGAAGATTTTATTGAAGTCGTTTCAAATATCTCCCAGCTGCACCATCCCAATGTAACAGAGCTCATTGGTTATTGTTCAGAGCATGGACAACATCTTCTGGTCTATGAGTTTCATAAAAGTGGATCATTGCATGACTTCCTTCACTTGCCAGATGAACATATCAAACCATTAATATGGAACTCCCGTGTCAAGATTGCTTTGGGAACTGCACGTGCTTTGGAGTACCTGCATGAAGTTTGTTCACCATCAGTTGTTCATAAAAATGTTAAATCAACCAACATATTGCTTGATACGGAGCTTAATCCTCATCTTTCTGACAGTGGATTGGCAAGCTATATTCCAAATGCCGACCAGGTATTAAACCATAATGCTGGATCGGGATATGAGGCACCTGAAGTTGGCCTGTCTGGTCAGTATACTCTGAAGAGTGATGTCTACAGCTTTGGAGTTGTCATGTTGGAGCTCCTTAGTGGACGGAAACCATTTGATAGCTCAAGGCCGAGGTTGGAGCAGTCTCTAGTTCGATGGGCAACTCCACAACTTCATGATATTGATGCACTGACTAAAATGGTTGATCCTGCACTGGAAGGTCTTTACCCTGTTAAGTCTCTTTCCAGGTTTGCTGATGTTATCGCTCTCTGCGTTCAGCCGGAGCCTGAATTCCGACCACCGATGTCAGAAGTGGTTCAGGCATTGGTCCGATTGGTGCAACGTGCAAACATGAGCAGGCGAACAACATTTGGATCCTCGGACGGAGGATCCCAACGAGGAGATAACCCAGAAGCACAAGAAATGTAA 2160 0.4426 MLEDGRLVVLFISICVLGLIPIAINGDTDPSDAAALRVMFGSMNSPSQLGWPASGDDACGQHWKGISCSGNRVTEIKLPGLGLTGTLGYQLQTLTSVINLDMSNNNLGGTIPYQLPPNVQRLNLANNNFTGEVAYSISDMTSLTYLNLGHNQLQGALSVNFQKLSSLSTLDLSFNSLSGDLPQSCTSLSSITTMYLQNNQFTGTIDILAGLPLQNLNVQNNHFTGWIPDQLKNINLQKDGNAWSSGPAPPPPPGTPPATSSTRTHKTGGGSGRNTPSNADTSDNDKKSGIGGGGIAGIVISILIVGAIVAFFLMKRRSRKPSADIENVDNQPFAPLASNEVHELKSVQTSSIPDTKTFVPSASFNLKPPPIDRHKSFDEDEFSKKPDIVKKTVTAPANVTLYSVADLQIATGSFSMDHLLGEGSFGRVYRAQFDGGEVLAVKKIDSSVLPNDMSEDFIEVVSNISQLHHPNVTELIGYCSEHGQHLLVYEFHKSGSLHDFLHLPDEHIKPLIWNSRVKIALGTARALEYLHEVCSPSVVHKNVKSTNILLDTELNPHLSDSGLASYIPNADQVLNHNAGSGYEAPEVGLSGQYTLKSDVYSFGVVMLELLSGRKPFDSSRPRLEQSLVRWATPQLHDIDALTKMVDPALEGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRANMSRRTTFGSSDGGSQRGDNPEAQEM 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1618g00010 719 Pfam Protein tyrosine and serine/threonine kinase 416 686 IPR001245 GO:0004672|GO:0006468
Pral1618g00010 719 SUPERFAMILY L domain-like 28 233 - -
Pral1618g00010 719 CDD STKc_IRAK 420 689 - -
Pral1618g00010 719 ProSitePatterns Protein kinases ATP-binding region signature. 420 443 IPR017441 GO:0005524
Pral1618g00010 719 MobiDBLite consensus disorder prediction 237 290 - -
Pral1618g00010 719 Gene3D Phosphorylase Kinase; domain 1 377 491 - -
Pral1618g00010 719 PANTHER LEUCINE RICH REPEAT KINASE 2 71 692 - -
Pral1618g00010 719 Gene3D Ribonuclease Inhibitor 33 180 IPR032675 -
Pral1618g00010 719 MobiDBLite consensus disorder prediction 259 285 - -
Pral1618g00010 719 SUPERFAMILY Protein kinase-like (PK-like) 396 686 IPR011009 -
Pral1618g00010 719 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 378 491 - -
Pral1618g00010 719 Gene3D Ribonuclease Inhibitor 181 245 IPR032675 -
Pral1618g00010 719 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 29 254 - -
Pral1618g00010 719 Gene3D Transferase(Phosphotransferase) domain 1 493 705 - -
Pral1618g00010 719 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 492 700 - -
Pral1618g00010 719 ProSiteProfiles Protein kinase domain profile. 414 689 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1618g00010 719 MobiDBLite consensus disorder prediction 697 719 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1618g00010 Pral-Chr1618 53702 60603 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1618g00010 1 699 Strubbelig Receptor Gene Family AT1G53730 66.572 0.0 878
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Pral1618g00010 PK_Tyr_Ser-Thr 2.9e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1618g00010 - - gmx:100807707 1056.2