Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1616g00011 ATGGCTTTCCTCCCCTTTCTTGATCATGAAAATCTTGTATTTCAGGTTTCTCGATCAATTGGTGATGTATATCTCAAAAGGGCAGAATTTAACAAGGAACCTTTGTATGCTAAGTTTCGTCTTCGTGAACCTTTTAGCAGACCAATTTTGAGCTCTGAGCCATCTATTTCTGTCCATGAACTTCAACAGCATGATCAGTTCCTCATATTCGCTTCTGATGGTTTGTGGGAACACCTTAGCAATCAGGATGCTGTTAACATAGTTCAAAATCACCCTCGCAGTGGAAGTGCTCGGAGACTGGTCAAAGCTGCCTTGCATGAAGCAGCCAAAAAAAGAGAGATGAGATACTCAGATTTGAAGAAAATTGACCGTGGTGTCCGCCGCCATTTCCATGATGACATTACAGTAGTAGTTGTATTCCTCGACTCCAATCTTGTGAGCAGAGATGGGCCGGTGAGAGGTCCTTCTTTATCAGTGAGGGGTGGAGGTGTTAACCTACGCGCTAAAACACTGGCTCCCTGCGCAACTCCTTTGGAAACTTAG 543 0.442 MAFLPFLDHENLVFQVSRSIGDVYLKRAEFNKEPLYAKFRLREPFSRPILSSEPSISVHELQQHDQFLIFASDGLWEHLSNQDAVNIVQNHPRSGSARRLVKAALHEAAKKREMRYSDLKKIDRGVRRHFHDDITVVVVFLDSNLVSRDGPVRGPSLSVRGGGVNLRAKTLAPCATPLET 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1616g00011 180 CDD PP2Cc 13 141 IPR001932 -
Pral1616g00011 180 Pfam Protein phosphatase 2C 13 111 IPR001932 -
Pral1616g00011 180 Gene3D - 10 149 IPR036457 -
Pral1616g00011 180 ProSiteProfiles PPM-type phosphatase domain profile. 1 141 IPR001932 -
Pral1616g00011 180 SUPERFAMILY PP2C-like 11 142 IPR036457 -
Pral1616g00011 180 PANTHER PROTEIN PHOSPHATASE 13 139 IPR015655 GO:0004722|GO:0006470
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1616g00011 Pral-Chr1616 52370 53662 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1616g00011 13 179 PP2C-type Phosphatase Gene Family AT4G38520 76.647 2.34e-94 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1616g00011 K01102 - nnu:104603663 299.671