Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1616g00001 ATGGCTGACGACGTTTCCGGCGAGAGGATCTATCTTCACGGAGATTTGGACTTGGACATTATCGAGGCCCGAATGTTGCCCAATATGGACGCTGTGTCTGAGCACTTCCGCCGTTGCGTCACTGGATGCGATACTATCAAATTCCGTTCATCCGATCCCGCTGCTGCAGCGGGCGACCGAGGCCACCGCAAAACTCACCAACATAAAAAAATCATTACCAGCGACCCTTATGTCACGGTTACTGTCCCACAGGCCACTGTTGCCCGTACACGTGTCATAAAGAATTCCCAAAACCCTTGCTGGAACGAGCACTTCAACATCCCCCTGGCACACCCCGTCATAGATTTGGAATTCCGCGTGAAAGATGACGACATTTTTGGTGCGCAACTCGTGGGAACTGTTAAAATTCCGGCGCAGGGGATTGCCTCCGGTGAACGTATTACTGGGTGGTTTCCAATTCTTGGATCCTCCGGTAAGCCACCCAAAAGCGAAACTGCGCTTTATATTGAAATGAAGTTCACGCCAGTTGAGAAGAACCGCTGTATCTTCGCGGCATCGCGAACGATCCCGAGCACAAGGGTGTGA 585 0.5179 MADDVSGERIYLHGDLDLDIIEARMLPNMDAVSEHFRRCVTGCDTIKFRSSDPAAAAGDRGHRKTHQHKKIITSDPYVTVTVPQATVARTRVIKNSQNPCWNEHFNIPLAHPVIDLEFRVKDDDIFGAQLVGTVKIPAQGIASGERITGWFPILGSSGKPPKSETALYIEMKFTPVEKNRCIFAASRTIPSTRV 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1616g00001 194 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 13 176 IPR035892 -
Pral1616g00001 194 ProSiteProfiles C2 domain profile. 1 151 IPR000008 -
Pral1616g00001 194 Pfam C2 domain 14 153 IPR000008 -
Pral1616g00001 194 Gene3D C2 domain 13 184 IPR035892 -
Pral1616g00001 194 PANTHER PHOSPHOLIPASE D 10 181 IPR015679 -
Pral1616g00001 194 CDD C2_plant_PLD 9 174 - -
Pral1616g00001 194 SMART C2_3c 15 150 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1616g00001 Pral-Chr1616 145 944 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1616g00001 1 185 Phospholipase D Gene Family (Wang group) AT4G35790 58.333 2.97e-72 229
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1616g00001 K01115 - gmx:100814486 257.299