Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1615g00022 ATGGAGTTCCACAAACTCGAAACCCCCAAAACTAACAGTGACCACGTCGTCATCAACATGGATCAACACCAAAACCCTAAACAAGATCATTCTCCTCATCAAGAACCCCCCACTACCAATAATACTACTCTCTCTCATCAACCCTATTATCCCAGAAACAGAACACTAAAACGCCTTAATTTTTCCAAACCAAAGTCGCGTTTTGAGGAGACCAACTACCCCATCTCAACCCCAAAACCAGCGTCGTACAATCCCATCCCTGAATCAGATGATCACCAGCCGCCCTTACCAGAAAACCCTACCACCTACTTATCCTCCACCGAAGACGACGACGACTACTGGTTCGAAAACGGAGACGAGTACGACTGGGACGACGCCGACGAAGCAACCGGGAAGTGCAGAAAGAAGAGGAAGCGGAAGATCAACAAGAGGGCTTTACTGGAATGGACTTTGTTCCTCATCATCATGACTTGCCTGGTATGTTCTCTCACTATTAAATCTCTCAAACACAAGATTCAGTGGGGCTTAGAAATCTGGAAATGGTGCTTGTTAGTGATGGTAATCTTCTGTGGCCGTCTCGTCTCCGGATGGGTAGTTCGTATCCTCGTCTTCCTCATCGAACGTAACTTCATGTTGAGGGAGAAAGTACTCTACTTCGTATACGGTCTTCGAAAGAGTTTTCAGAACTGCGTTTGGCTAGCCCTAGTTTTGATCGCATGGATGATTATGTTTCACGACGCTCATAAGAAAAACAAAGTCCTCAAGAAGTTCTTCAGGGCTCTCATCGCCATCCTCGTCGGAGCAACCATATGGTTATTAAAAATAGTTCTCGTTAAGGTTCTAGCGTCGTCGTTCCACGTCGCGGCGTTCTTTGACAGAATGAAAGAGAGTGTTTTCCATCACTACGTGTTGGACGCACTTTCAGGGCCGCCGTTGGACGAGGAGGACAGAGACCTGCCGCGCCGGCACTTGCAGGCGTCGAAGTCGATGCCGGCGAGGCTGAGGTACGAGAAGTCTCAGCCGTTGAAGTCGAGGTCCAGGAAAGGGGATGGGTCGAGAAGGATCGACATAGAGAAGCTGAAGAGGCTGAGCATGGATGGGAGAGCGACGGCGTGGAGCGTGAAGAGGTTGGTGAGCTACGTGATGTCGTCGGGACTGTCGACGATTTCGAGGACGGTGGACGATTTCGCCGACGCCGAGTCGGAGATTAATAGCGAGTGGGAGGCTCGGACTTGTGCTCAGAGGATATTCAAGAATGTTGCAAAGGATGGAGCCAAGCACATAGAGGAAGAAGATTTACTGAGATTCTTGAAGAGAGACGAAGTGTACATGATATTTCCTTTATTTGGAGGAGCACTTGAAACTGGAAAAATTACCAAGTCCTCATTTCGAAATTGGGTGGTATATGCGTACGTTGAGAGAAAAGCATTGGCACATTCATTAAACGATACGAAAACAGCAGTTCGACAACTACACAAATTGGCGAGTGCGATTGTAATAGTGATCATAACTGTGATGTCTCTGTTGGTGATGGGTTTGGCCACAACCAAAGTCATCTTTGTCGTCACTTCTCAACTGTTGCTCGTAGGTTTTGTGTTCCAAAATATGTGCAAAACTGTCTTTGAATCCATCATCTTCGTCTTCATCATGCACCCTTTCGACGTCGGAGACCGTTGTGTCATTGATAACATTCAGATGATTGTAGAAGAGATGAATATATTGACGACAGTGTTCTTAAGATATGACGGCGAGAAAATATATTATCCGAATTCAGTTCTTCTGACGAAACCAATAAGCAATTTCAGAAGAAGCCCAGATATGGCTGACGCTGTGGAATTCACTATTGATGCCTCTACCTCTATGGACAATATCACTGCCCTCAAGAAGGCCTTTCAAGCGTACATTGAGAGCAAACCAAAGTACTGGAATCCAAAACACGTAGTAATAGTGAAAGAGATAGAGAACATGGACAAGTTGAAGATGGCACTCTGCGTCCAACACACCATTAATCATCAAAACTTCGGCGAGCGTACTGCCCGGCGATCGGAGCTTTTGCTGGAGATGAAGAAGATCTTTGAGAGCCTTGGAATTAAGTATCGTCTTCTTCCTCAAGAAGTACATCTCACGCAGGTTAACTTTGGCAACCGTAATGGAGCCTTCCCACTATCATCTTCATAA 2178 0.4628 MEFHKLETPKTNSDHVVINMDQHQNPKQDHSPHQEPPTTNNTTLSHQPYYPRNRTLKRLNFSKPKSRFEETNYPISTPKPASYNPIPESDDHQPPLPENPTTYLSSTEDDDDYWFENGDEYDWDDADEATGKCRKKRKRKINKRALLEWTLFLIIMTCLVCSLTIKSLKHKIQWGLEIWKWCLLVMVIFCGRLVSGWVVRILVFLIERNFMLREKVLYFVYGLRKSFQNCVWLALVLIAWMIMFHDAHKKNKVLKKFFRALIAILVGATIWLLKIVLVKVLASSFHVAAFFDRMKESVFHHYVLDALSGPPLDEEDRDLPRRHLQASKSMPARLRYEKSQPLKSRSRKGDGSRRIDIEKLKRLSMDGRATAWSVKRLVSYVMSSGLSTISRTVDDFADAESEINSEWEARTCAQRIFKNVAKDGAKHIEEEDLLRFLKRDEVYMIFPLFGGALETGKITKSSFRNWVVYAYVERKALAHSLNDTKTAVRQLHKLASAIVIVIITVMSLLVMGLATTKVIFVVTSQLLLVGFVFQNMCKTVFESIIFVFIMHPFDVGDRCVIDNIQMIVEEMNILTTVFLRYDGEKIYYPNSVLLTKPISNFRRSPDMADAVEFTIDASTSMDNITALKKAFQAYIESKPKYWNPKHVVIVKEIENMDKLKMALCVQHTINHQNFGERTARRSELLLEMKKIFESLGIKYRLLPQEVHLTQVNFGNRNGAFPLSSS 725
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1615g00022 725 MobiDBLite consensus disorder prediction 330 352 - -
Pral1615g00022 725 MobiDBLite consensus disorder prediction 12 50 - -
Pral1615g00022 725 Gene3D - 552 601 IPR023408 -
Pral1615g00022 725 MobiDBLite consensus disorder prediction 66 83 - -
Pral1615g00022 725 MobiDBLite consensus disorder prediction 1 109 - -
Pral1615g00022 725 MobiDBLite consensus disorder prediction 338 352 - -
Pral1615g00022 725 FunFam Predicted mechanosensitive ion channel 552 601 - -
Pral1615g00022 725 Pfam Mechanosensitive ion channel 493 698 IPR006685 GO:0016020|GO:0055085
Pral1615g00022 725 SUPERFAMILY Sm-like ribonucleoproteins 542 601 IPR010920 -
Pral1615g00022 725 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 23 711 IPR016688 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1615g00022 Pral-Chr1615 215580 223292 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1615g00022 31 712 Mechanosensitive Ion Channel Family AT5G12080 45.134 0.0 600
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1615g00022 K22048 - qsu:112001851 1013.45