Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1615g00010 ATGGCCGGCCTTGACTTAGGTTCAGCATCTCACTTTGTTCATCAGCTTCAACGCCCTGATCTTCACTCAAATCATGGAGATGACAACCGGCAGGACCAGGACGACGATGACCCTCAAGGGCTTGAGCTAGTTACTCCGAACTCTGGGGGATCTGGCGGCGGAAGTGGCAGTGGTGAGGGCAGTGGTCGTCGGCCAAGGGGCCGGCCTCCTGGCTCGAAGAACAAGCCGAAACCGCCGGTGATCATCACCAGAGAAAGTGCAAACACGCTTAGGGCTCATATCCTTGAAGTTAGCAGCGGCTCCGATGTGTTTGACTCGGTAGCAACCTATGCTAGGAAGCGACAGAGAGGGATCTGCGTCCTCAGCGGCAGCGGCACCGTCACCAACGTGACCTTACGGCAACCAACAGCCGCCGGTGCCGTCGTGACCCTGCACGGGAGGTTTGAGATACTGTCCTTGGCTGGATCTTTTTTGCCGCCTCCAGCTCCGCCGGGGGCCACCAGCCTGACGATATTTCTCGCCGGAGGGCAAGGTCAAGTTGTGGGAGGAAACGTTGTTGGTGCCTTGATAGCTGCTGGACCTGTTATTGTAATTGCTTCCTCATTTTCAAACGTAGCATATGAGAGATTGCCCTTAGATGAAGAAGAATCACTTCAGATGCAGCAAGGTCAATCTTCCGGCGCGCGCGGCGGCGGCGGCGGCAACTCGTTCCCGGACCCTTCTTCAGGGCTGCCGTTCTTTAATCTGCCATTAAACATGCCGCAGTTACCCGTTGACGGTTGGGCCGGAAACTCAGGTGGTGGTGGGAGGCAACCATATTGA 822 0.5645 MAGLDLGSASHFVHQLQRPDLHSNHGDDNRQDQDDDDPQGLELVTPNSGGSGGGSGSGEGSGRRPRGRPPGSKNKPKPPVIITRESANTLRAHILEVSSGSDVFDSVATYARKRQRGICVLSGSGTVTNVTLRQPTAAGAVVTLHGRFEILSLAGSFLPPPAPPGATSLTIFLAGGQGQVVGGNVVGALIAAGPVIVIASSFSNVAYERLPLDEEESLQMQQGQSSGARGGGGGNSFPDPSSGLPFFNLPLNMPQLPVDGWAGNSGGGGRQPY 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1615g00010 273 FunFam AT-hook motif nuclear-localized protein 90 217 - -
Pral1615g00010 273 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 25 228 IPR014476 GO:0003680
Pral1615g00010 273 ProSiteProfiles PPC domain profile profile. 87 224 IPR005175 -
Pral1615g00010 273 CDD DUF296 91 174 IPR005175 -
Pral1615g00010 273 MobiDBLite consensus disorder prediction 1 80 - -
Pral1615g00010 273 MobiDBLite consensus disorder prediction 18 32 - -
Pral1615g00010 273 Gene3D - 90 225 - -
Pral1615g00010 273 SUPERFAMILY AF0104/ALDC/Ptd012-like 87 218 - -
Pral1615g00010 273 MobiDBLite consensus disorder prediction 215 250 - -
Pral1615g00010 273 MobiDBLite consensus disorder prediction 217 231 - -
Pral1615g00010 273 Pfam Plants and Prokaryotes Conserved (PCC) domain 91 204 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1615g00010 Pral-Chr1615 114218 115579 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1615g00010 1 273 AT-hook Motif Nuclear Localized (AHL) Family AT2G35270 61.565 4.72e-100 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1615g00010 - - gmx:100803960 370.933