Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1612g00019 ATGGCTGATTCGAATTTCCAATCCTACACCCAGCTTTTCTTCATTTGGTTACTCACCACCATCCTAGTTCGGACAATACTGAAGATGAAAAAGAATGCTCGTCGTCCTCCCAGCCCAATGGCCCTCCCTGTCATCGGACACCTTCACCTTCTTTCCCCTCTTCCTCACCAAGACTTGCACAAACTCGCCCATCGCTATGGTCCTGTCATGCACCTTTACCTCGGCTCTGAACCTTGTGTGATCGTTTCCACTGCTGACGCTGCCAAAGAATTCCTTAAAACTCACGAACTTACCTTCTCCAATCGACCAGCTGAAACTGCTGCTGTCAAGCACTTGTCCTACGAATTCAAAGATTTCTTGTTTGCCCCCTATGGACCCTACTGGAAGTTCATGAAGAAGCTGTGCATGTCTGAACTTCTCGGCGGGAGAATGCTTGATCAATTCCGTTTGGTGAGGGAGCAGGAGATGAAGAGATTTCTGACAAACTTGGTTCAAAAAGGGAAGTTCGGTGGTGAGGCGGTGAATCTTGAGGCGGAGCTCTTGGTTCTTTCAAATAACATTATATGCAGAATGGCTCTAAGTCGAACGAGTTCTGAAAGCGAAGACGATGCTGACGTGATGAGGAAGTTGGTGATCGGTGCGGCTGAGCTCACTGGACAGTTTAACATATCAGACTTCATTCCGTTCTTCAGGATATTGGATTTGACGGGATTCAACAAGAAGTTGCGGGAAGCTCAACGGAAGTTTGATACCTTCTTGGAGAGAATAATAGAAGAGCATCAAGTAGAAAGGAGAAAAAGAAAAGAGATGGGTGCCAGAGGAGATCACGTCCGGGACATACTGGACGCTTTGTTAGACATACATGAAGACGAGAACGCCGAGATGAAATTGACAAGAGAAAATATCAAGGCCTTTATCATCGACATATTTGTGGCTGGGACAGACACATCAGCCTTAACCATGGAATGGGCTCTCGCAGAGTTAATCAGCCATCCGCATGTACTGGAGAAAGCACGGCAAGAAATTGACTCGGTGGTGGGAAAGAACAGAATAGTAGGAGAGTCAGATATACCAAAACTTCCGTACCTTCAAGCTATAGTAAAAGAAGCAATGAGGCTTCACCCTGCAGGTGCACTGATCTTCAGGGAATCATCAGAAGGCTGTGTAGCTAGCGGATACGAAATCCCAGCGAAGACCCGCTTATTTGTAAACGCGTGGGGTATTGCTAGGGACCCTAATTACTGGAAGGACCCACTAGAGTTTAAGCCGGAGAGATTTATGACCGAAGATGGAAATGCAGAGAGTCAAATGAGCGTTAGGGGTCAGCATTTTGAGTTCCTTCCTTTTGGAAGTGGAAGAAGAGGATGTCCTGGAACCTCGCTAGCCCTTCAGGTTGTGCAAACCAATCTTGCTGCCATGATTCAATTGTTCGAATGGAAGATGGATGGTCCGGTTAGCATGGAGGAAAAGCCTGGGATTACCATTTCAAGGGCTCATCCCTTGATTTGTGTCCCTGTGCCCAGGCTTCACCCATTTCCTTCTATATCTTTGTGA 1554 0.4678 MADSNFQSYTQLFFIWLLTTILVRTILKMKKNARRPPSPMALPVIGHLHLLSPLPHQDLHKLAHRYGPVMHLYLGSEPCVIVSTADAAKEFLKTHELTFSNRPAETAAVKHLSYEFKDFLFAPYGPYWKFMKKLCMSELLGGRMLDQFRLVREQEMKRFLTNLVQKGKFGGEAVNLEAELLVLSNNIICRMALSRTSSESEDDADVMRKLVIGAAELTGQFNISDFIPFFRILDLTGFNKKLREAQRKFDTFLERIIEEHQVERRKRKEMGARGDHVRDILDALLDIHEDENAEMKLTRENIKAFIIDIFVAGTDTSALTMEWALAELISHPHVLEKARQEIDSVVGKNRIVGESDIPKLPYLQAIVKEAMRLHPAGALIFRESSEGCVASGYEIPAKTRLFVNAWGIARDPNYWKDPLEFKPERFMTEDGNAESQMSVRGQHFEFLPFGSGRRGCPGTSLALQVVQTNLAAMIQLFEWKMDGPVSMEEKPGITISRAHPLICVPVPRLHPFPSISL 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1612g00019 517 PRINTS P450 superfamily signature 447 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1612g00019 517 PRINTS P450 superfamily signature 312 329 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1612g00019 517 PRINTS P450 superfamily signature 456 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1612g00019 517 PRINTS P450 superfamily signature 365 376 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1612g00019 517 Gene3D Cytochrome P450 27 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1612g00019 517 PANTHER CYTOCHROME P450 98A9 11 510 - -
Pral1612g00019 517 SUPERFAMILY Cytochrome P450 36 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1612g00019 517 Pfam Cytochrome P450 36 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1612g00019 517 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1612g00019 517 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1612g00019 517 PRINTS E-class P450 group I signature 404 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1612g00019 517 PRINTS E-class P450 group I signature 183 201 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1612g00019 517 PRINTS E-class P450 group I signature 446 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1612g00019 517 PRINTS E-class P450 group I signature 364 382 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1612g00019 517 PRINTS E-class P450 group I signature 456 479 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1612g00019 517 PRINTS E-class P450 group I signature 301 318 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1612g00019 517 PRINTS E-class P450 group I signature 321 347 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1612g00019 517 CDD CYP93 67 505 - -
Pral1612g00019 517 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 449 458 IPR017972 GO:0005506|GO:0016705
Pral1612g00019 517 FunFam Cytochrome P450 family protein 27 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1612g00019 Pral-Chr1612 74236 76414 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1612g00019 5 508 Cytochrome P450 AT5G06900 48.323 1.78e-170 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1612g00019 K24188 - gmx:100779342 672.159