Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1612g00018 ATGGCTTCTTTCCCATTCTACGCCCAACTTTTCCTGATATGGGTAGTGTCAGCCATTCTGGTTCGAGCCCTACTCACCAGATATCAGAGCAAGGCTCGTCTTCCACCAGGCCCTCCGTCCCTCCCTCTCATCGGGCACTTCCACCTTCTTCCGCCGTTACCTCATCGAGCTCTTCATAATCTCTCCGCTCGTTATGGACCCATCATCCAACTTTTCCTTGGCTCTGTTCCTTGTGTTGTTGCTTCCACACCTGAAACCGCCAGAGAGTTCCTTAAAACCCATGAATCTTATTTCTCAAACAGGTTAGCAACCGGTGCCGTCCGCTACTTATCATATGGATTAAAAGGTTTCATGTTTGCAGCTTATGGACCCTACTGGAAGTTCATGAAGAAGATATGCATGTCCCAGCTTCTGGGTGCCCGCACCCTCGACATCCTCCATCCTGTGAGGCGTGATGAGACCATGAAGTTTCTGGGTGTTTTGCTCAGAAAAGGGCTGGCGGCCGAAGCCATTGATGTTGGCCACGAGCTCATGACATTGGCCAATGGTATCATATCAAGAATGATCATGAGTCGATCTTCTTCCGGAAACGATGATGAAGCCAAAGAAATTAGGAAGTTGGTGACTGACACGGCAGAGCTCGCGGGGAAGTTCAATCTATCTGATTTTATTTGGTTGTTAAAGAACATCAATTTGCAGGGCCGATTGAACAAAAGGCTGAAAGAAATTCGTGATAGGTTTGACGCTTTGATGGAGGAGGTGATAAAGGAGCATGAAGACGAAAGAAGGAAAAGGATAGAGCTTGGGGAAGGTGGTCAAATAAGAGATTTGCTTGACATTTTACTGGACATACATGAAGATGAGGCTTCTGAGATGAAAATTTCCATGGAAAACATCAAGGCTTTCGTCTTGGATTTGTTCATGGCCGGAACGGACACTTCTGCCCTAACCACAGAATGGGCTTTAGCAGAATTGATTAATCACCCTCATGTGATGGAGAAAGCAAGACAAGAGATCGATTCAGTGGTGGGAACAAGTAGAATAGTAGAGGAATCTGACATAGTCAAATTACCTTACCTGCAAGCCATAGTTAAAGAAACTCTAAGGATTCATCCGCCGGCGCCATTGTTAGGAAGATTATCATCTGAAAGCTGCAACGTGGGTGGTTACGACATTCCAGCAAAAACGTTTCTGATGGTAAACTTGTGGTCAATTGGGAGGGACCCCAAGTTCTGGGAGGACCCACTTGGGTTCAGGCCAGAGAGATTTATGAACATGGAAGCAAGTGGGAGGGGGAATTTGGACGTTAGAGGGCAAAATTTTGAGCTGATTCCTTTTGGGAGTGGAAGAAGAAGCTGTCCAGGAGTCTCACTGGCACAATTAGTAGTGAAAACAAACCTAGCTGCCATGATTCAGTGTTTTGAGTGGACAGTGAATGGAGGCAATGGAACTGTGGATATGGAGGAGAAACCATCTATGACCCTTCCAAGGGCTCATCCCTTGATGTGTGTCCCTCTGCCACGTCCCCACCTCCTTCCTTTTATCATGCATGTGATTGAGCAGGCATAG 1569 0.4665 MASFPFYAQLFLIWVVSAILVRALLTRYQSKARLPPGPPSLPLIGHFHLLPPLPHRALHNLSARYGPIIQLFLGSVPCVVASTPETAREFLKTHESYFSNRLATGAVRYLSYGLKGFMFAAYGPYWKFMKKICMSQLLGARTLDILHPVRRDETMKFLGVLLRKGLAAEAIDVGHELMTLANGIISRMIMSRSSSGNDDEAKEIRKLVTDTAELAGKFNLSDFIWLLKNINLQGRLNKRLKEIRDRFDALMEEVIKEHEDERRKRIELGEGGQIRDLLDILLDIHEDEASEMKISMENIKAFVLDLFMAGTDTSALTTEWALAELINHPHVMEKARQEIDSVVGTSRIVEESDIVKLPYLQAIVKETLRIHPPAPLLGRLSSESCNVGGYDIPAKTFLMVNLWSIGRDPKFWEDPLGFRPERFMNMEASGRGNLDVRGQNFELIPFGSGRRSCPGVSLAQLVVKTNLAAMIQCFEWTVNGGNGTVDMEEKPSMTLPRAHPLMCVPLPRPHLLPFIMHVIEQA 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1612g00018 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
Pral1612g00018 522 FunFam Cytochrome P450 family protein 26 503 - -
Pral1612g00018 522 Gene3D Cytochrome P450 19 503 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1612g00018 522 Pfam Cytochrome P450 35 499 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1612g00018 522 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 13 504 - -
Pral1612g00018 522 SUPERFAMILY Cytochrome P450 27 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1612g00018 522 CDD CYP93 66 505 - -
Pral1612g00018 522 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1612g00018 522 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1612g00018 522 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1612g00018 522 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1612g00018 522 Coils Coil 233 253 - -
Pral1612g00018 522 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1612g00018 522 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1612g00018 522 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1612g00018 522 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1612g00018 522 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1612g00018 522 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1612g00018 522 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1612g00018 522 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1612g00018 Pral-Chr1612 64079 66149 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1612g00018 1 514 Cytochrome P450 AT5G06900 46.318 2.37e-168 484
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1612g00018 K24188 - qsa:O6P43_006566 659.833