Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1612g00017 ATGGCTTCGTTCCAAGCCTACTTACAACTAGTCCTGATATGGGCAGTGCCCATCATTCTGGTTCGAGCCATACTCACCAGATATCAGAGCAAGGCTCGTCTTCCACCAGGCCCTCCGTCCCTACCTCTCATCGGACACTTCCACCTTCTTCCGCCGTTACCGCATCGAGCTCTTCATAATCTCTCCGCTCGTTATGGACCCATCATCCAACTTTTCCTCGGCTCTGTCCCTTGTGTTGTTGCTTCCACACCTGAAACCGCCAGAGAGTTCCTTAAAACCCATGAATCTTGTTTCTCCGACAGGATCGTAAACGCTGCCGTCCATCACTTCTCATATGGATCCAAAGGTTTCCTGTTTGCCGCTTATGGACCCTACTGGAAGTTCGTGAAGAAGCTATGCATGTCCCAGCTTCTGGGTGCTCGCACCCTCGACATCCTCCATCCGGTGAGGCGAGATGAGACCATGAAGTTTCTGGGAGTTTTGCTCAGAAAAGGGCTGGCGGCCGAAGCCATTGATGTTGGCCACGAGCTCATGACATTGGCCAATGGTATCATATCAAGAATGATAATGAGTCGATCTTCTTCCGGAAACGATGATGAAGCCAAAGAAATTAGGAAGTTGGTGACTGACACGGCAGAGCTCGCGGGGAAGTTCAACCTATCTGATTTTATTTGGTTGTTAAAGAACACCAATTTGCAGGGCCGATTGAACAAAAGGCTGAAAGAAACTCGGGACAGGTTTGACGCTTTGTTGGAGGAGGTGATAAAGGAGCATGAACACGAAAGGAGGAAAAGGAAGGAGCTGCATGAAGATGGTCAAATAAGAGATTTGCTTGATATTTTACTGGACATACATGAAGATGAGACTTCTGAGATCAAGTTTTCCATGGAGAACATTAAGGCTTTTGTCTTGGACTTGTTCATGGCCGGAACGGACACATCTGCCTTAACCACAGAGTGGGCATTAGCAGAATTAATCAATCACCCTCGTGTGATGGAGAAAGCAAGACAAGAGATTGATTCAGTTGTGGGAACGAGTAGAATAGTGGAGGAATCTGACATGGTCAAATTGCCTTATCTGCAAGCCATATTTAAAGAAACGCTAAGGATCCATCCCACTGTGCCATTGTTAGGAAGACTATCATCTGATAGCTGCAACGTCTGCGGCTATGAGATTCCCGCAAAAACGTTGTTGCTTGTTAATTTGTGGTCACTTGGGAGAGACCCCAAACTTTGGGAAGACCCACTTGAGTTCAGACCAGAGAGATTTGTAGGCACAGAAGCAAGTGGGAAGGGGAATCTGGATGTTAGAGGGCAACATTTTGAGCTGATTCCTTTTGGGAGTGGAAGAAGAAGCTGTCCAGGAGCTTCATTGGCGCAACAGGTTGTGAAAACAAACCTAGCCGCTATGATTCAGTGTTTTGAGTGGAAAGTGAATGGAGGCAATGGAACTGTGGATATGGAGGAGAAACCATCCATGACCCTTCCAAGGGCTCATCCCTTAATATGTGTCCCTCTGCCACGTCCTAACCTCCTTCCTTCCATCTTGCAGGTAATGGAACAGGCATAG 1569 0.4736 MASFQAYLQLVLIWAVPIILVRAILTRYQSKARLPPGPPSLPLIGHFHLLPPLPHRALHNLSARYGPIIQLFLGSVPCVVASTPETAREFLKTHESCFSDRIVNAAVHHFSYGSKGFLFAAYGPYWKFVKKLCMSQLLGARTLDILHPVRRDETMKFLGVLLRKGLAAEAIDVGHELMTLANGIISRMIMSRSSSGNDDEAKEIRKLVTDTAELAGKFNLSDFIWLLKNTNLQGRLNKRLKETRDRFDALLEEVIKEHEHERRKRKELHEDGQIRDLLDILLDIHEDETSEIKFSMENIKAFVLDLFMAGTDTSALTTEWALAELINHPRVMEKARQEIDSVVGTSRIVEESDMVKLPYLQAIFKETLRIHPTVPLLGRLSSDSCNVCGYEIPAKTLLLVNLWSLGRDPKLWEDPLEFRPERFVGTEASGKGNLDVRGQHFELIPFGSGRRSCPGASLAQQVVKTNLAAMIQCFEWKVNGGNGTVDMEEKPSMTLPRAHPLICVPLPRPNLLPSILQVMEQA 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1612g00017 522 Coils Coil 233 271 - -
Pral1612g00017 522 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 446 455 IPR017972 GO:0005506|GO:0016705
Pral1612g00017 522 Pfam Cytochrome P450 35 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1612g00017 522 PRINTS P450 superfamily signature 453 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1612g00017 522 PRINTS P450 superfamily signature 309 326 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1612g00017 522 PRINTS P450 superfamily signature 362 373 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1612g00017 522 PRINTS P450 superfamily signature 444 453 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1612g00017 522 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 12 502 - -
Pral1612g00017 522 FunFam Cytochrome P450 family protein 26 503 - -
Pral1612g00017 522 Gene3D Cytochrome P450 26 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1612g00017 522 CDD CYP93 66 505 - -
Pral1612g00017 522 PRINTS E-class P450 group I signature 401 425 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1612g00017 522 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1612g00017 522 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1612g00017 522 PRINTS E-class P450 group I signature 318 344 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1612g00017 522 PRINTS E-class P450 group I signature 361 379 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1612g00017 522 PRINTS E-class P450 group I signature 298 315 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1612g00017 522 PRINTS E-class P450 group I signature 453 476 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1612g00017 522 PRINTS E-class P450 group I signature 443 453 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral1612g00017 522 SUPERFAMILY Cytochrome P450 27 508 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1612g00017 Pral-Chr1612 58764 61039 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1612g00017 1 508 Cytochrome P450 AT5G06900 45.882 5.77e-168 483
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1612g00017 K24188 - gmx:100779342 647.121