Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1612g00001 ATGGAGACCGATAATGGTGACACCAGGTCCAAGATGGAAGACTATGAAGTGATTGAGCAAATTGGCAGAGGGGCATTCGGCTCCGCTTACCTTGTTCTCCATAACTCTGAGAATAAGAAGTATGTGTTGAAGAAGATTCGCTTGACCAAGCAAACCGAGAAATTCAAGCGAACAGCGCACCAAGAGATGAACCTGATTGCAAAACTAAATAACCCATATATGTGGAGTACAAAGATGCTTGGGTAG 246 0.439 METDNGDTRSKMEDYEVIEQIGRGAFGSAYLVLHNSENKKYVLKKIRLTKQTEKFKRTAHQEMNLIAKLNNPYMWSTKMLG 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1612g00001 81 ProSiteProfiles Protein kinase domain profile. 15 81 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1612g00001 81 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Pral1612g00001 81 Gene3D Phosphorylase Kinase; domain 1 1 78 - -
Pral1612g00001 81 SUPERFAMILY Protein kinase-like (PK-like) 9 74 IPR011009 -
Pral1612g00001 81 Pfam Protein kinase domain 15 73 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1612g00001 81 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 12 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1612g00001 Pral-Chr1612 586 1925 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1612g00001 12 71 Core Cell Cycle Gene Families AT3G48750 35.000 8.99e-07 42.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Pral1612g00001 Pkinase 1.1e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1612g00001 K08857 - qsa:O6P43_006546 134.806