Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1605g00010 ATGGGATTCCTCTTCAAAAAGCCTCAATTTCCTGAGAAGCTAATACTTTGGTGGATACTGCTAGTTGGCTATTTAACATTGTTCCCACCATCTCCTGTTTCCTCTTTCATGACTTCACTAAATAGTGAAACAAATGCTTTGCTAAAGTGGAAAGCCAGCCTTGACAGCTATAGCCAAACTGTGTTATCATCATGGAAGGATAATAACAGTTGTACTTGCAAATGGGTTGGAATCTCATGCAATGAGCTCAACTCAATTTCCAGTATATCTCTTCCGAATTTTGGATTAAGAGGTACGCTTGATAGTCTCAATTTCTCATCTTTCCCCAATCTCCAATTCTTAGTACTTGGAGGTAATCAACTTATTGGTTCCATTCCCAATGAACTTGGAATGTTAAAGGAAGTAGTTGAACTTGACTTGTCAAGAAACAATCTCTTTGGCAACATCCCTGCCACTATAGGAAATATGACCAATTTGCACCATATTTATCTTTTTTCCAATCAAATCTCAGGACCAATTACATGGGAAGTAGGGAAGCTCTACTCTATGGAGACATTGGATTTGTTAGAGAACAATATATCAGGTTCAATCCCACCCTCTATTTGGAACTTGGCTAATTTAAGCAACTTCTCTGTTTATCAAAATAACCTTTCTGGATATATTCCTTCTAGCATTGGAAACTTGACAAAGCTCACCTATCTAAATTTGTGTGGAAATAAACTTAGTGGCAACCTTCCATCAGAAATGAATAACTTTAGGAAATTAAGATCCTTGCATATTGGAGAAAATAATTTCAAAGGTCACTTCCCTCAAGACATCTGTGTGGGAGGATTACTTGCTAACATCACTGCACATAGGAATCATTTTACTGGTCCAATTCCTAGAAGTTTGAAGAACTGCTCTAACCTTATCAGAGTTAGGTTTGAAAGTAATCAATTGATAGGAAATGTCACAAATGCTTTTGGTGTATGCCCACACTTAAACTACATTGATTTGAGTAACAATGCATTTTATGGCCACTTGTCACCTATATGGGGGCAGTACCGTAACCTTGCAACCCTCAAGATCTCAAATAATAACTTATTTGGGGGAATACCATTAGAACTAGGTAAGGCAACCAAGTTACAGAGTCTTGATTTTTCATGGAATCACTTGACAGGAAGTATTCCAAAGGAATTGAGTCAGTTATCATTAATGATTGAACTTACGTTGAGCAACAATCAACTTTCAAGAAACATTCCTATTGATATAGGATTGTTGACTAACCTTGAACAGTTGAGTCTAGCTAACAATCATTTAAGTGGCTCAATTCCAGAACAACTAGGAGGGTTGACCAAATTATGGGAATTGAACATAAGTGGAAACAAGTTCTTTAGCATTCCCATTAGTTTTGGTCAATTACAACAACTTCAGTCTCTTGATCTTAGTGGAAATTCATTTATTGGGGGAATCCCAACAATGCTTGGAGAGCTACATCGATTGGAAATGTTGAATCTCTCGCACAACAATTTCTCAGGAACTATTCCTTCACTTTTTGTTGATATGAATAGCTTGGCTATAATTGACATATCATACAATCAATTAGAAGGTCCACTTCCAAATATTTTAGCCTTTCGTACAGCTACGATGGGGAGATTAATAGGCAACAAAGGCTTATGTGGTGATCAATTTGGCTTACCAATTTGCCCAACAACAAATTTTGACTCAAGTCATTCCAAGAGCAAGAAAGTGTTGATCTATGTTGTATCTTTTAGTTTAGGAGTTGTGATGCTAGCAACATCTTCCATTGGGATTTCATATATTATTTGCCATCACAAAGCAAGGAAAACAAAAGTTCAAGAAACAAAAGCGCAAACTCAAAATTTGTTTGCTATATGGAGTTATGATGGGAAACTAGTATATGAAAACATTATTGAAGTCACAGAGGAGTTCAACGAAAAATATCTCATTGGGGAAGGAGTATCTGGAAGTGTCTACAAAGCAAAATTATCCACAGGTCAGGTTGTGGCGGTGAAGAAGCTTCATTCAGTACCAGACAAGGATATGTGTCATCAGAAAGCTTTTATGAGTGAGATTAGAGCCTTAACAGAAACTAGGCATCATAATATCATCAGGCTATATGGTTTTTGCTGGCATTCAAAGGTCTCCTTTTTGGTTTATGAATTCTTGGAAGGAGGTAGCTTGGACAAGATCCTAAGAGAAGAGACACAAGCAATTACATTAGATTGGAGCAAAAGAATCAAAGTTGTTGAAGGTGTGGCTAATGCTTCATACTATCTTCATCATGGATGCTCACCTCCGATAATTCATCGTGACATATCAAGCAAAAATGTTATTTTAGACTCAGATTATGAGGCTCACATCTCTGACTTCGGGACAGCCAAGCTTTTGTATCCAGATTCTAACAATTGGACCTCATTTGCTGGTACCTTTGGCTATGCTGCTCCAGTGACTGAGAAATGTGACATTTATAGCTTTGGAGTGTTGGCTCTAGAAATAATTATGGGAAAGCATCCAAGAGATCTCGTAATGTCATGTTTCTCATCAACATCTTCTGGTGCAGCACCAACAATAATTGCTCATGATTTGGATTTGAACGAAGTGTTAGACCAAAGGCTACCTTATCCTCAAGACTTAGTGGCTGAGAAGGTGATGTTGATTGCAAGAATAGCTTCTACTTGCTTGAATGAAAATCCACGTGCTCGCCCAACCATGGAGCAAGTATGTAAGGAGCTTGCCATGCCAAAATAA 2751 0.3766 MGFLFKKPQFPEKLILWWILLVGYLTLFPPSPVSSFMTSLNSETNALLKWKASLDSYSQTVLSSWKDNNSCTCKWVGISCNELNSISSISLPNFGLRGTLDSLNFSSFPNLQFLVLGGNQLIGSIPNELGMLKEVVELDLSRNNLFGNIPATIGNMTNLHHIYLFSNQISGPITWEVGKLYSMETLDLLENNISGSIPPSIWNLANLSNFSVYQNNLSGYIPSSIGNLTKLTYLNLCGNKLSGNLPSEMNNFRKLRSLHIGENNFKGHFPQDICVGGLLANITAHRNHFTGPIPRSLKNCSNLIRVRFESNQLIGNVTNAFGVCPHLNYIDLSNNAFYGHLSPIWGQYRNLATLKISNNNLFGGIPLELGKATKLQSLDFSWNHLTGSIPKELSQLSLMIELTLSNNQLSRNIPIDIGLLTNLEQLSLANNHLSGSIPEQLGGLTKLWELNISGNKFFSIPISFGQLQQLQSLDLSGNSFIGGIPTMLGELHRLEMLNLSHNNFSGTIPSLFVDMNSLAIIDISYNQLEGPLPNILAFRTATMGRLIGNKGLCGDQFGLPICPTTNFDSSHSKSKKVLIYVVSFSLGVVMLATSSIGISYIICHHKARKTKVQETKAQTQNLFAIWSYDGKLVYENIIEVTEEFNEKYLIGEGVSGSVYKAKLSTGQVVAVKKLHSVPDKDMCHQKAFMSEIRALTETRHHNIIRLYGFCWHSKVSFLVYEFLEGGSLDKILREETQAITLDWSKRIKVVEGVANASYYLHHGCSPPIIHRDISSKNVILDSDYEAHISDFGTAKLLYPDSNNWTSFAGTFGYAAPVTEKCDIYSFGVLALEIIMGKHPRDLVMSCFSSTSSGAAPTIIAHDLDLNEVLDQRLPYPQDLVAEKVMLIARIASTCLNENPRARPTMEQVCKELAMPK 916
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1605g00010 916 Gene3D Phosphorylase Kinase; domain 1 603 722 - -
Pral1605g00010 916 Pfam Leucine rich repeat N-terminal domain 41 81 IPR013210 -
Pral1605g00010 916 PANTHER LEUCINE RICH REPEAT KINASE 2 201 916 - -
Pral1605g00010 916 SUPERFAMILY L domain-like 42 315 - -
Pral1605g00010 916 FunFam Leucine-rich repeat receptor-like protein kinase 723 915 - -
Pral1605g00010 916 Pfam Leucine rich repeat 469 528 IPR001611 GO:0005515
Pral1605g00010 916 SUPERFAMILY Protein kinase-like (PK-like) 626 912 IPR011009 -
Pral1605g00010 916 FunFam Nuclear pore complex protein NUP107 40 199 - -
Pral1605g00010 916 Pfam Protein kinase domain 645 910 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1605g00010 916 Gene3D Ribonuclease Inhibitor 282 566 IPR032675 -
Pral1605g00010 916 SUPERFAMILY RNI-like 221 532 - -
Pral1605g00010 916 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 252 566 - -
Pral1605g00010 916 SMART LRR_typ_2 108 132 IPR003591 -
Pral1605g00010 916 SMART LRR_typ_2 180 204 IPR003591 -
Pral1605g00010 916 SMART LRR_typ_2 373 396 IPR003591 -
Pral1605g00010 916 SMART LRR_typ_2 228 252 IPR003591 -
Pral1605g00010 916 SMART LRR_typ_2 444 467 IPR003591 -
Pral1605g00010 916 SMART LRR_typ_2 491 514 IPR003591 -
Pral1605g00010 916 SMART LRR_typ_2 420 443 IPR003591 -
Pral1605g00010 916 Gene3D Transferase(Phosphotransferase) domain 1 723 916 - -
Pral1605g00010 916 Pfam Leucine Rich Repeat 374 395 IPR001611 GO:0005515
Pral1605g00010 916 ProSitePatterns Protein kinases ATP-binding region signature. 650 673 IPR017441 GO:0005524
Pral1605g00010 916 Gene3D Ribonuclease Inhibitor 41 194 IPR032675 -
Pral1605g00010 916 Gene3D Ribonuclease Inhibitor 195 281 IPR032675 -
Pral1605g00010 916 FunFam Leucine-rich repeat receptor protein kinase MSP1 607 722 - -
Pral1605g00010 916 ProSiteProfiles Protein kinase domain profile. 644 916 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1605g00010 916 ProSitePatterns Tyrosine protein kinases specific active-site signature. 768 780 IPR008266 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1605g00010 Pral-Chr1605 352722 355726 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1605g00010 96 818 Receptor kinase-like Gene Family AT4G08850 45.007 0.0 607
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral1605g00010 Pkinase 8.8e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1605g00010 - - lang:109325563 898.271