Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1605g00006 ATGACTAACCTGTGGTACTTAGCTCTTGGAGGTAATCAGTTTACTGGTTCTATACCCCATGAGATCGGAATGATGAAGGGACTTGTTCAACTTGACATGTCAAGCAACAATCTCTCTGGTAGCATCCCCAGTACTATCGGAAACATGTCTAGTTTACAACAAGTTTATCTTTATTCCAATCAAATTTCTGGGCAGATTCCACAGCAAATTGAGAAACTCTATTCTTTGGAAAGATTGCAATTGTCAGACAATAACATAGTGGGGTCAATCCCACCATCCATAGGGAACTTGATCAATCTAAGCAACCTTCTCCTTTTTGAAAACAACCTCTCTGGATCTATTCCGTCCAGCATTGGAAACTTGACAAAGCTCTCCATGCTATATTTAGCAACAAACAACCTCTCTGGATCTATTCCGTCCAGCATTGGAAACTTGACAAAGCTCTCCATGCTAGATTTGGAAAAAAACAACCTCTCTGGATCTATTCCGTCCAGTATTGGAAACTTGACAAAGCTCTCCATACTACATTTGGCAATAAACAACCTCTCTGGATCTATTCCGTCTAGCATTGGAAACTTGACTGAGCTCTCCCTACTAAATTTGGTTCAAAACAAACTTAGTGGCAATCTTCCACCAGAGATGAATAACCTTACAAAATTGGTAAGCTTGCAACTTGGATACAATGATTTCAAAGGTCATTTGCCTCAAGACATTTGCCTTGGAGGATTACTTACAAAAATCTTTGCAAGTAACAATCAATTCACTGGTCCAATTCCAAGAAGTTTGAAGAACTGCTCTAGCCTTATTAGAGTCAGGCTTGAAAGTAATCAACTTACAGGGAATGTCACAGAAGCTTTTGGTGTATATCCACACTTGGACTATATTGATTTAAGTAACAATGCACTTTATGGCCACTTGTCACCCACATGGGGGCACTGCAATAACCTTACAAACCTTGAGATCTCTTCTAATAACTTGTCGGGGGGCATACCACCAGAACTAAGTCAGGCAACAAAGTTACAACGACTTCATTTTTCATCAAATCACTTGATAGGAAATATTCCAAAGGAATTAAGCCTTTTGTCATTATTGAGTGAACTTAGTTTGAGCAACAATCAACTTTCAAGAAACATTCCTATCGAGATAGGATTGTTGACGAAACTTGAACAATTAAATCTAGCTAACAATCACTTAAGTGGCTCAATTCCAGAACAATTGGGAAGGTTGACCAAATTATGGGAATTGAACATAAGTGGAAATAAGTTCTTTAGCATTCCCACTAGTTTTGGTCGATTGCAACAGCTTCAGTTTCTTGATCTTAGTGGAAACTCATTTACTTGTAGAATCCCAGCAATGCTTGGAGAGCTACAACGATTGGAAACATTGAACCTCTCATGTAACAATTTCTCTGGAATGATTCCTTCATCTTTTGATGATTTGAAAAGCTTGACTATGGTTGACATATCACACAATAAATTAGAAGGTCCACTTCCAAATATTTTAGCCTTTCGTACAGCTACAATGGAGAGATTAATAGGCAACAAAGGCTTATGTGGTAATCTATCTAGCCTACCAATTTGTCCAACAACAAATTTTGAATCAAGCCATTCCAAGAGCAAGAAAGTAGAGATTTATGTTGTATCCTTTAGTTTGGGAGCTGTGATGCTGGCAACATTTTTTGCTTGGATTTCATATATTATTTTCCATCACAAAGCAAGAAAAACAGAAAGTCAAGTGCAAACTCAAAATTTATTTGCCATATGGAGTTATGATGGGAAATTAGTATATGAAAACATTATTGAAGCCACAGAGGAGTTTGATGAAAAATATCTCATTGGAGAGGGAGCATCTGGAAGTGTCTACAAAGCAGAACTATCCACAGGTCAAGTTGTGGCTGTGAAGAAGTTTTATTCAGTACCAGACAAGGATATGTGTCATCAAAAAGCTTTTATGAGTGAGATTAGGGCCTTAACAGAAACTAGGCATAATAATATCATCAAGCTATATGGGTTTTGTTGGCATTCAAAGGTCTCATTTTTGGTTTATGAATTCCTAGAAGGAGGCAGCATAGACAAGATACTAAGTGAAGAGACACAAGCAATTGCATTCGATTGGACTAAAAGAATCAAAGTTATTGAAGGTGTGGCTAATGCTTTATACTATCTTCATCATGGATGCTCACCTCCGATAGTTCATCGTGACCTATCAAGCAAAAATGTTATTTTAGACTCAGATTATGAGGCTCACATCTCTGACTTTGGGACAGCCAAGCTTTTGTATCCAGATTCTAGCAATTGGACCTCATTTGCTGGTACCTTTGGCTATGCTGCTCCAGGTTAA 2340 0.3795 MTNLWYLALGGNQFTGSIPHEIGMMKGLVQLDMSSNNLSGSIPSTIGNMSSLQQVYLYSNQISGQIPQQIEKLYSLERLQLSDNNIVGSIPPSIGNLINLSNLLLFENNLSGSIPSSIGNLTKLSMLYLATNNLSGSIPSSIGNLTKLSMLDLEKNNLSGSIPSSIGNLTKLSILHLAINNLSGSIPSSIGNLTELSLLNLVQNKLSGNLPPEMNNLTKLVSLQLGYNDFKGHLPQDICLGGLLTKIFASNNQFTGPIPRSLKNCSSLIRVRLESNQLTGNVTEAFGVYPHLDYIDLSNNALYGHLSPTWGHCNNLTNLEISSNNLSGGIPPELSQATKLQRLHFSSNHLIGNIPKELSLLSLLSELSLSNNQLSRNIPIEIGLLTKLEQLNLANNHLSGSIPEQLGRLTKLWELNISGNKFFSIPTSFGRLQQLQFLDLSGNSFTCRIPAMLGELQRLETLNLSCNNFSGMIPSSFDDLKSLTMVDISHNKLEGPLPNILAFRTATMERLIGNKGLCGNLSSLPICPTTNFESSHSKSKKVEIYVVSFSLGAVMLATFFAWISYIIFHHKARKTESQVQTQNLFAIWSYDGKLVYENIIEATEEFDEKYLIGEGASGSVYKAELSTGQVVAVKKFYSVPDKDMCHQKAFMSEIRALTETRHNNIIKLYGFCWHSKVSFLVYEFLEGGSIDKILSEETQAIAFDWTKRIKVIEGVANALYYLHHGCSPPIVHRDLSSKNVILDSDYEAHISDFGTAKLLYPDSSNWTSFAGTFGYAAPG 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1605g00006 779 ProSiteProfiles Protein kinase domain profile. 606 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1605g00006 779 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 217 531 - -
Pral1605g00006 779 FunFam Leucine-rich repeat receptor protein kinase MSP1 569 684 - -
Pral1605g00006 779 SUPERFAMILY RNI-like 1 279 - -
Pral1605g00006 779 ProSitePatterns Protein kinases ATP-binding region signature. 612 635 IPR017441 GO:0005524
Pral1605g00006 779 SMART LRR_typ_2 25 49 IPR003591 -
Pral1605g00006 779 SMART LRR_typ_2 73 97 IPR003591 -
Pral1605g00006 779 SMART LRR_typ_2 480 503 IPR003591 -
Pral1605g00006 779 SMART LRR_typ_2 217 241 IPR003591 -
Pral1605g00006 779 SMART LRR_typ_2 361 384 IPR003591 -
Pral1605g00006 779 SMART LRR_typ_2 456 479 IPR003591 -
Pral1605g00006 779 SMART LRR_typ_2 409 432 IPR003591 -
Pral1605g00006 779 SMART LRR_typ_2 385 408 IPR003591 -
Pral1605g00006 779 SMART LRR_typ_2 169 193 IPR003591 -
Pral1605g00006 779 SMART LRR_typ_2 121 145 IPR003591 -
Pral1605g00006 779 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 150 213 - -
Pral1605g00006 779 Gene3D Phosphorylase Kinase; domain 1 566 684 - -
Pral1605g00006 779 ProSitePatterns Tyrosine protein kinases specific active-site signature. 730 742 IPR008266 GO:0004672|GO:0006468
Pral1605g00006 779 Pfam Leucine rich repeat 454 493 IPR001611 GO:0005515
Pral1605g00006 779 Pfam Leucine rich repeat 28 86 IPR001611 GO:0005515
Pral1605g00006 779 Pfam Leucine rich repeat 387 444 IPR001611 GO:0005515
Pral1605g00006 779 FunFam Leucine-rich repeat receptor protein kinase EMS1 69 149 - -
Pral1605g00006 779 PANTHER LEUCINE RICH REPEAT KINASE 2 166 778 - -
Pral1605g00006 779 SUPERFAMILY Protein kinase-like (PK-like) 585 778 IPR011009 -
Pral1605g00006 779 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 1 68 - -
Pral1605g00006 779 Gene3D Ribonuclease Inhibitor 1 239 IPR032675 -
Pral1605g00006 779 Gene3D Ribonuclease Inhibitor 240 531 IPR032675 -
Pral1605g00006 779 Gene3D Transferase(Phosphotransferase) domain 1 685 779 - -
Pral1605g00006 779 Pfam Protein kinase domain 608 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1605g00006 779 SUPERFAMILY RNI-like 186 502 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1605g00006 Pral-Chr1605 188878 191714 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1605g00006 1 779 Receptor kinase-like Gene Family AT4G08850 46.134 0.0 687
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral1605g00006 Pkinase 3.4e-34 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1605g00006 - - gmx:106796400 855.129