Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1605g00005 ATGACTAACCTGTGGTACTTAGCTCTTGGAGGTAATCAGTTTACTGGTTCTATACCCCATGAGATCGGAATGATGAAGGGACTTGTTCAACTTGACATGTCAAGCAACAATCTCTCTGGTAGCATCCCCAGTACTATCGGAAACATGTCTAGTTTACAACAAGTTTATCTTTATTCCAATCAAATTTCTGGGCAGATTCCACAGCAAATTGAGAAACTCTATTCTTTGGAAAGATTGCAATTGTCAGACAATAACATAGTGGGGTCAATCCCACCATCCATAGGGAACTTGATCAATCTAAGCAACCTTCTCCTTTTTGAAAACAACATTTGTGGATCTATTCCGTCTAGCATTGGAAACTTGACAAAGCTCTCCATGCTAGATTTGACAACAAACAACCTCTCTGGATATATTCCATCTAGCATTGGAAACTTGACAAAGCTCTCCGTGCTATATTTAGCATCAAACAACCTCTCTGGATCTATTCCGTCCAGCATTGGAAACTTGACAAAGCTCTCCATGCTATATTTAGCAACAAACAACCTCTCTGGATCTATTCCGTCCAGCATTGGAAACTTGACAAAGCTCTCCATGCTAGATTTGGAAAAAAACAACCTCTCTGGATCTATTCCGTCCAGTATTGGAAACTTGACAAAGCTCTCCATACTACATTTGGCAATAAACAACCTCTCTGGATCTATTCCGTCTAGCATTGGAAACTTGACTGAGCTCTCCCTACTAAATTTGGTTCAAAACAAACTTAGTGGCAATCTTCCACCAGAGATGAATAACCTTACAAAATTGGTAAGCTTGCAACTTGGATACAATGATTTCAAAGGTCATTTGCCTCAAGACATTTGCCTTGGAGGATTACTTACAAAAATCTTTGCAAGTAACAATCAATTCACTGGTCCAATTCCAAGAAGTTTGAAGAACTGCTCTAGCCTTATTAGAGTCAGGCTTGAAAGTAATCAACTTACAGGGAATGTCACAGAAGCTTTTGGTGTATATCCACACTTGGACTATATTGATTTAAGTAACAATGCACTTTATGGCCACTTGTCACCCACATGGGGGCACTGCAATAACCTTACAAACCTTGAGATCTCTTCTAATAACTTGTCGGGGGGCATACCACCAGAACTAAGTCAGGCAACAAAGTTACAACGACTTCATTTTTCATCAAATCACTTGATAGGAAATATTCCAAAGGAATTAAGCCTTTTGTCATTATTGAGTGAACTTAGTTTGAGCAACAATCAACTTTCAAGAAACATTCCTATCGAGATAGGATTGTTGACGAAACTTGAACAATTAAATCTAGCTAACAATCACTTAAGTGGCTCAATTCCAGAACAATTGGGAAGGTTGACCAAATTATGGGAATTGAACATAAGTGGAAATAAGTTCTTTAGCATTCCCACTAGTTTTGGTCGATTGCAACAGCTTCAGTTTCTTGATCTTAGTGGAAACTCATTTACTTGTAGAATCCCAGCAATGCTTGGAGAGCTACAACGATTGGAAACATTGAACCTCTCATGTAACAATTTCTCTGGAATGATTCCTTCATCTTTTGATGATTTGAAAAGCTTGACTATGGTTGACATATCACACAATAAATTAGAAGGTCCACTTCCAAATATTTTAGCCTTTCGTACAGCTACAATGGAGAGATTAATAGGCAACAAAGGCTTATGTGGTAATCTATCTAGCCTACCAATTTGTCCAACAACAAATTTTGAATCAAGCCATTCCAAGAGCAAGAAAGTAGAGATTTATGTTGTATCCTTTAGTTTGGGAGCTGTGATGCTGGCAACATTTTTTGCTTGGATTTCATATATTATTTTCCATCACAAAGCAAGAAAAACAGAAAGTCAAGTGCAAACTCAAAATTTATTTGCCATATGGAGTTATGATGGGAAATTAGTATATGAAAACATTATTGAAGCCACAGAGGAGTTTGATGAAAAATATCTCATTGGAGAGGGAGCATCTGGAAGTGTCTACAAAGCAGAACTATCCACAGGTCAAGTTGTGGCTGTGAAGAAGTTTTATTCAGTACCAGACAAGGATATGTGTCATCAAAAAGCTTTTATGAGTGAGATTAGGGCCTTAACAGAAACTAGGCATAATAATATCATCAAGCTATATGGGTTTTGTTGGCATTCAAAGGTCTCATTTTTGGTTTATGAATTCCTAGAAGGAGGCAGCATAGACAAGATACTAAGTGAAGAGACACAAGCAATTGCATTCGATTGGACTAAAAGAATCAAAGTTATTGAAGGTGTGGCTAATGCTTTATACTATCTTCATCATGGATGCTCACCTCCGATAGTTCATCGTGACCTATCAAGCAAAAATGTTATTTTAGACTCAGATTATGAGGCTCACATCTCTGACTTTGGGACAGCCAAGCTTTTGTATCCAGATTCTAGCAATTGGACCTCATTTGCTGGTACCTTTGGCTATGCTGCTCCAGAACTTTCTTACACAATGGAAGTAACCGAAAAATGTGACGTTTATAGCTTTGGAGTGTTGGCTTTGGAAATAATTATGGGAAAGCATCCAAGAGATCTCATAATTTCGTGTTTCTCATCAACATCTTCTGGTGTAGCACCAATATTAGTTGCTCACAATTTGGATATGAAGAAAGTGCTAGACCAAAGGCTACCTTATCCTCAAGGCTTAGTGGCTGAGAAGGTGATGTTGACTGCAAGAGTAGCTTTCACTTGCTTGAATGAAAATCCACGTGCTCGCCCAACTATTGACCAAGTATGCAAGGATCTTGCCATGCAAAAATCACATCTTTCTGGTTCCATTCCATAG 2826 0.3829 MTNLWYLALGGNQFTGSIPHEIGMMKGLVQLDMSSNNLSGSIPSTIGNMSSLQQVYLYSNQISGQIPQQIEKLYSLERLQLSDNNIVGSIPPSIGNLINLSNLLLFENNICGSIPSSIGNLTKLSMLDLTTNNLSGYIPSSIGNLTKLSVLYLASNNLSGSIPSSIGNLTKLSMLYLATNNLSGSIPSSIGNLTKLSMLDLEKNNLSGSIPSSIGNLTKLSILHLAINNLSGSIPSSIGNLTELSLLNLVQNKLSGNLPPEMNNLTKLVSLQLGYNDFKGHLPQDICLGGLLTKIFASNNQFTGPIPRSLKNCSSLIRVRLESNQLTGNVTEAFGVYPHLDYIDLSNNALYGHLSPTWGHCNNLTNLEISSNNLSGGIPPELSQATKLQRLHFSSNHLIGNIPKELSLLSLLSELSLSNNQLSRNIPIEIGLLTKLEQLNLANNHLSGSIPEQLGRLTKLWELNISGNKFFSIPTSFGRLQQLQFLDLSGNSFTCRIPAMLGELQRLETLNLSCNNFSGMIPSSFDDLKSLTMVDISHNKLEGPLPNILAFRTATMERLIGNKGLCGNLSSLPICPTTNFESSHSKSKKVEIYVVSFSLGAVMLATFFAWISYIIFHHKARKTESQVQTQNLFAIWSYDGKLVYENIIEATEEFDEKYLIGEGASGSVYKAELSTGQVVAVKKFYSVPDKDMCHQKAFMSEIRALTETRHNNIIKLYGFCWHSKVSFLVYEFLEGGSIDKILSEETQAIAFDWTKRIKVIEGVANALYYLHHGCSPPIVHRDLSSKNVILDSDYEAHISDFGTAKLLYPDSSNWTSFAGTFGYAAPELSYTMEVTEKCDVYSFGVLALEIIMGKHPRDLIISCFSSTSSGVAPILVAHNLDMKKVLDQRLPYPQGLVAEKVMLTARVAFTCLNENPRARPTIDQVCKDLAMQKSHLSGSIP 941
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1605g00005 941 Gene3D Transferase(Phosphotransferase) domain 1 733 938 - -
Pral1605g00005 941 ProSitePatterns Protein kinases ATP-binding region signature. 660 683 IPR017441 GO:0005524
Pral1605g00005 941 Pfam Leucine rich repeat 502 541 IPR001611 GO:0005515
Pral1605g00005 941 Pfam Leucine rich repeat 27 86 IPR001611 GO:0005515
Pral1605g00005 941 Pfam Leucine rich repeat 435 492 IPR001611 GO:0005515
Pral1605g00005 941 Pfam Leucine rich repeat 147 206 IPR001611 GO:0005515
Pral1605g00005 941 SUPERFAMILY RNI-like 1 287 - -
Pral1605g00005 941 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 205 927 - -
Pral1605g00005 941 FunFam Leucine-rich repeat receptor protein kinase MSP1 617 732 - -
Pral1605g00005 941 Gene3D Ribonuclease Inhibitor 1 131 IPR032675 -
Pral1605g00005 941 SMART LRR_typ_2 25 49 IPR003591 -
Pral1605g00005 941 SMART LRR_typ_2 217 241 IPR003591 -
Pral1605g00005 941 SMART LRR_typ_2 73 97 IPR003591 -
Pral1605g00005 941 SMART LRR_typ_2 409 432 IPR003591 -
Pral1605g00005 941 SMART LRR_typ_2 504 527 IPR003591 -
Pral1605g00005 941 SMART LRR_typ_2 121 144 IPR003591 -
Pral1605g00005 941 SMART LRR_typ_2 457 480 IPR003591 -
Pral1605g00005 941 SMART LRR_typ_2 433 456 IPR003591 -
Pral1605g00005 941 SMART LRR_typ_2 265 289 IPR003591 -
Pral1605g00005 941 SMART LRR_typ_2 145 169 IPR003591 -
Pral1605g00005 941 SMART LRR_typ_2 193 216 IPR003591 -
Pral1605g00005 941 SMART LRR_typ_2 528 551 IPR003591 -
Pral1605g00005 941 FunFam Predicted protein 163 260 - -
Pral1605g00005 941 Pfam Protein kinase domain 656 927 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1605g00005 941 FunFam Leucine-rich receptor-like protein kinase family protein 68 162 - -
Pral1605g00005 941 SMART LRR_sd22_2 145 171 - -
Pral1605g00005 941 SMART LRR_sd22_2 25 51 - -
Pral1605g00005 941 SMART LRR_sd22_2 193 219 - -
Pral1605g00005 941 Gene3D Ribonuclease Inhibitor 289 579 IPR032675 -
Pral1605g00005 941 Gene3D Ribonuclease Inhibitor 132 288 IPR032675 -
Pral1605g00005 941 SUPERFAMILY RNI-like 232 550 - -
Pral1605g00005 941 ProSiteProfiles Protein kinase domain profile. 654 931 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1605g00005 941 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 265 579 - -
Pral1605g00005 941 ProSitePatterns Tyrosine protein kinases specific active-site signature. 778 790 IPR008266 GO:0004672|GO:0006468
Pral1605g00005 941 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 1 67 - -
Pral1605g00005 941 FunFam MDIS1-interacting receptor like kinase 2 733 935 - -
Pral1605g00005 941 SUPERFAMILY Protein kinase-like (PK-like) 633 932 IPR011009 -
Pral1605g00005 941 Gene3D Phosphorylase Kinase; domain 1 614 732 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1605g00005 Pral-Chr1605 188444 191714 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1605g00005 1 826 Receptor kinase-like Gene Family AT4G08850 45.694 0.0 717
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral1605g00005 Pkinase 1.3e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1605g00005 - - qsa:O6P43_026950 992.26