Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1605g00003 ATGACCTCACTAAATAGTGAAGCAAATGCTCTGCTCAAGTGGAAAGCCAGCCTTGACCACCAAAGCCAAACTGTGTTATCATCATGGAAGGATAATGGCAGTCATCCTTGCAAATGGGTTGGAATCACATGCAATGAGCTCAACTCCATTTCCAATATATCTCTTCTAGATTTTGGACTAAGAGGTACGCTTGATAGTCTCAATTTCTCATCTTTCCCTCATCTTCAAATCATACAGATGCAACGGAACTCATTTTATGGGAATATTCCTCCCCAGATTGGTGAACTATCCAAACTCAGTCTACTAGATTTTTCTCATAATGAGTTCTCCGGTAGCATTCCAACAAGTATTGCCAACCTCTCCTCCCTCATCTTTCTTTATCTTCCTGATAACAATTTTGTTGGAGCATTTCCAGTTGAGATCCTAGAGTTGACTAGGCTTAGTGATCTGGTCTTATGTTATAATTATTTCAGTGGCCATATTCCTGAAGCTATAACAAATTTGACCAACCTATCAAACTTTAACCTAGAAATCAACAATTTTTCTGGTCATATTCCTCCACAAATTGGTAGGTTGGTTAACATTTATTACTTATCACTTCATGGCAATCAGCTTACTGGTTCTATCCCTGATGGGATTGGAATGCTCAAGGGACTTGAGCAACTTGACATGTCAGAAAACAATCTCTCTGGATATATTCCTTCAAGCATTGGAAACTTGACAAAGCTCTTCACGCTAGATTTAGGACCAAACAACCTCTCTGGATCTATTCCTTCTAGCATTGGCAACATGATTGAGCTCTCCATACTAAATCTACTTCAAAACAAACTTAGTGGCAATCTTCCACTAGAAATGAATAACCTTAGGAAGTTGCAAAGCTTACAACTTGCAAACAATAATTTCAAAGGTCATTTGCCTCAAGACATTTGCCTTGGAGGATTACTTAAGAATATCTCTATAACTAACAATCAATTCACTGGTCCAATTCCAAGAAGTTTGAAGAATTGCTCTAGCCTTATCAGAGTCAGGCTAGACAGTAATCAACTTACAGGGAATGTCACAGAAGCTTTCGGTATATATCCATACTTAAACTATATTAATTTAAGTAGCAATGCACTTTATGGCCACTTGTCACCTATGTGGGGGCAGTGCCATAACCTTACAAACCTTGAGATCTCTTATAATAACTTGTCAGGGGGCATACCACCAGAGCTAGGTCAGGCAAAAAAGTTACAGCGACTTAATTTTTCATCGAATCACTTGACAGGAAATATTCCAAAGGAATTGAGCCACTTGTCATTATTGAGTGAACTTAGTCTAAGCAACAATCAACTTTCAAGAAACATTCCTATTGAGATAGGATTGTTGACGAAACTTGAAAAATTAAGTCTAGCTAACAATCACTTAAGTGGCTCAATTCCAGAACAACTGGGAGGGTTGACCAAATTATGGGAATTGAACTTAAGTGGAAATAAGTTCTTCAGCATTCCCATTAGTTTTGGCCAATTGCAACATCTTCAGTTTCTTGATCTTAGTGAAAATTCATTTACCGGCAGAATCCCAGCAATGCTTGGAGAGTTACAACTGGAAATGTTGAACCTCTCATATAACAATTTCTCTGGAATGATTCCTTCAACTTTTAATGATTTGAAAAGCTTGACTATGGTTGACATATCACACAATAAATTAGAAGGTCCACTTCCAAATATTTCAGCCTTTCGTACAGCTACAATGGAGAGATTAATAGGCAACAAAGGCTTATGTGGTAATCTATCTGGCCTACCAATTTGCCCAACAACAAATTTTGACTCAAGCCATTCCAAGAGCAGGAAAGTGGTTATCTATGTTGTATCCTTTAGTTTGGGAGCTGTGATGCTAGCAACATTTTTCATCGGGATTTCATATATTATTTTCCATCACAAAGCAAGGAAAACAGAAAGTCAAGAAAGAGAAGTGCAAACTCAAAATTTATTTGCCATATGGAGTTATGATGGGAAATTAGTATATGAAAATATTATTGAAGCCACAGAGGAGTTCAACGAAAAATATCTCATTGGAGAGGGAGGATCTGGAAGTGTTTACAAAGCAGAATTATCCACAGGTCAAGTTGTGGCTGTGAAGAAGCTTCATTCAATACCAGACAGGGATATGTGCCTCCAGAAAGCTTTTATTAGTGAGATTAGGGCCTTAACAGAAACTCGGCATCATAATATTGTCAAGCTATATGGGTTTTGCTGGCATTCAAAGGTCTCATTTTTGGTTTATGAATTCTTAGAAGGAGGCAGCTTGGACAAGATACTAAGTGAAGAGACACAAGCAATTGCATTGGATTGGACTAAAAGAATCAAAGTTGTTGAAGGTGTGGCTAATGCTTCATACTATCTTCATCATGGATGCTCACCTTCGATAGTTCATCGTGACCTATCAAGCAAAAATGTTATTTTAGACTCGAATTATGAGGCTCACATCTCTGACTTTGGGACAGCCAAGCTTTTGTATCCAGATTCTACCAATTGGACTTCATTTGCTGGCACCTTTGGCTATGCTGCTCCAGAACTTGCTTACACAATGGAAGTTACTGAGAAATGTGACGTTTATAGTTTTGGAGTGTTAGCTCTGGAAATAATTATGGGAAAGCATCCAAGAGATCTCATAATGTCATGTTTCTCGTCAACATCTTCTGGTGTCGTGCCAACAATTGTTGCTCATGATTTGGATTTGAAGGGAGTGTTAGACCAAAGGCTACCTTATCCTCGAGGCTCAGTGGTTGAGAAGGTGATGTTGATTGCAAGAATAGCTTTTACTTGCTTGAATGAAAATCCACGTAGTCGCCCAACCATGGACCAAGTATGTAAGGAGTTTGCCATGCCAAAATCACATGTTTCTGGTTCCATTCCATAG 2901 0.3844 MTSLNSEANALLKWKASLDHQSQTVLSSWKDNGSHPCKWVGITCNELNSISNISLLDFGLRGTLDSLNFSSFPHLQIIQMQRNSFYGNIPPQIGELSKLSLLDFSHNEFSGSIPTSIANLSSLIFLYLPDNNFVGAFPVEILELTRLSDLVLCYNYFSGHIPEAITNLTNLSNFNLEINNFSGHIPPQIGRLVNIYYLSLHGNQLTGSIPDGIGMLKGLEQLDMSENNLSGYIPSSIGNLTKLFTLDLGPNNLSGSIPSSIGNMIELSILNLLQNKLSGNLPLEMNNLRKLQSLQLANNNFKGHLPQDICLGGLLKNISITNNQFTGPIPRSLKNCSSLIRVRLDSNQLTGNVTEAFGIYPYLNYINLSSNALYGHLSPMWGQCHNLTNLEISYNNLSGGIPPELGQAKKLQRLNFSSNHLTGNIPKELSHLSLLSELSLSNNQLSRNIPIEIGLLTKLEKLSLANNHLSGSIPEQLGGLTKLWELNLSGNKFFSIPISFGQLQHLQFLDLSENSFTGRIPAMLGELQLEMLNLSYNNFSGMIPSTFNDLKSLTMVDISHNKLEGPLPNISAFRTATMERLIGNKGLCGNLSGLPICPTTNFDSSHSKSRKVVIYVVSFSLGAVMLATFFIGISYIIFHHKARKTESQEREVQTQNLFAIWSYDGKLVYENIIEATEEFNEKYLIGEGGSGSVYKAELSTGQVVAVKKLHSIPDRDMCLQKAFISEIRALTETRHHNIVKLYGFCWHSKVSFLVYEFLEGGSLDKILSEETQAIALDWTKRIKVVEGVANASYYLHHGCSPSIVHRDLSSKNVILDSNYEAHISDFGTAKLLYPDSTNWTSFAGTFGYAAPELAYTMEVTEKCDVYSFGVLALEIIMGKHPRDLIMSCFSSTSSGVVPTIVAHDLDLKGVLDQRLPYPRGSVVEKVMLIARIAFTCLNENPRSRPTMDQVCKEFAMPKSHVSGSIP 966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1605g00003 966 SUPERFAMILY RNI-like 282 568 - -
Pral1605g00003 966 SUPERFAMILY Protein kinase-like (PK-like) 661 952 IPR011009 -
Pral1605g00003 966 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase At1g17230 288 601 - -
Pral1605g00003 966 Gene3D Phosphorylase Kinase; domain 1 638 757 - -
Pral1605g00003 966 ProSitePatterns Protein kinases ATP-binding region signature. 685 708 IPR017441 GO:0005524
Pral1605g00003 966 Gene3D Ribonuclease Inhibitor 3 162 IPR032675 -
Pral1605g00003 966 PANTHER LEUCINE RICH REPEAT KINASE 2 246 960 - -
Pral1605g00003 966 Pfam Protein kinase domain 680 952 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1605g00003 966 SMART LRR_typ_2 288 312 IPR003591 -
Pral1605g00003 966 SMART LRR_typ_2 550 573 IPR003591 -
Pral1605g00003 966 SMART LRR_typ_2 96 120 IPR003591 -
Pral1605g00003 966 SMART LRR_typ_2 480 502 IPR003591 -
Pral1605g00003 966 SMART LRR_typ_2 456 479 IPR003591 -
Pral1605g00003 966 SMART LRR_typ_2 432 455 IPR003591 -
Pral1605g00003 966 SMART LRR_typ_2 168 192 IPR003591 -
Pral1605g00003 966 SMART LRR_typ_2 528 549 IPR003591 -
Pral1605g00003 966 SMART LRR_typ_2 503 527 IPR003591 -
Pral1605g00003 966 SMART LRR_typ_2 216 240 IPR003591 -
Pral1605g00003 966 Pfam Leucine rich repeat N-terminal domain 5 45 IPR013210 -
Pral1605g00003 966 ProSiteProfiles Protein kinase domain profile. 679 956 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1605g00003 966 Pfam Leucine rich repeat 528 563 IPR001611 GO:0005515
Pral1605g00003 966 Pfam Leucine rich repeat 194 253 IPR001611 GO:0005515
Pral1605g00003 966 FunFam Leucine-rich repeat receptor protein kinase MSP1 642 757 - -
Pral1605g00003 966 ProSitePatterns Tyrosine protein kinases specific active-site signature. 803 815 IPR008266 GO:0004672|GO:0006468
Pral1605g00003 966 FunFam MDIS1-interacting receptor like kinase 2 758 960 - -
Pral1605g00003 966 Gene3D Ribonuclease Inhibitor 260 494 IPR032675 -
Pral1605g00003 966 Gene3D Ribonuclease Inhibitor 495 590 IPR032675 -
Pral1605g00003 966 Gene3D Transferase(Phosphotransferase) domain 1 758 962 - -
Pral1605g00003 966 SUPERFAMILY RNI-like 52 374 - -
Pral1605g00003 966 Gene3D Ribonuclease Inhibitor 163 259 IPR032675 -
Pral1605g00003 966 FunFam Leucine-rich repeat receptor-like protein kinase TDR 40 287 - -
Pral1605g00003 966 SMART LRR_sd22_2 384 416 - -
Pral1605g00003 966 SMART LRR_sd22_2 456 482 - -
Pral1605g00003 966 SMART LRR_sd22_2 216 242 - -
Pral1605g00003 966 SMART LRR_sd22_2 96 122 - -
Pral1605g00003 966 SMART LRR_sd22_2 550 572 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1605g00003 Pral-Chr1605 129271 132738 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1605g00003 7 851 Receptor kinase-like Gene Family AT4G08850 43.584 0.0 708
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral1605g00003 Pkinase 1.8e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1605g00003 - - qsa:O6P43_015300 1030.39