Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1605g00001 ATGGAGAGATTGAAGGGCAACAAAGGCTTATCAATTTGCCCAACAACAAATTTTGACTCAAGCCATTCCAAGAGTAGGAAAGTGGTGATCTATGTTGTATCCTTCAGTTTGAGAGCTGTGATGCTAGCAACATTTTTTGCTGGGATTTCATATATTATTTTCCATCACAAAGCAAGGAAAACAGAAAGTCACAAAAGAGAAGTGCAAACTCAAAATTTGTTTGCTATATGGAGTTATGATGATGGGAAATTAGTATATGGAAACATTATTGAAGCCACAAAGGAGTTCATCAAAAAATATCTCATTAGGGAGAGAGGATCTGGAAGTGTCTATAAAGCAGAATTATCCACAGGTCAAGTTGTGGCTGTGAAGAAGCCTCATTTAGGACTAGACAGGGATATGTGTTATCACAAAGCTTTTATGAGTGAGATTAGAGCGTTGATAGAAACTAGGCATCATAATATCATCAAGCTATATTGGTTTTGTTGGCATGCAAAGGTCTCCTTTTTGGTTTATGAATTCTTAGAAGGAGGCAATTTGGACAAGATACTAAGAGAAGAGACACAAGCAATTGCATTGGATTGGACTAAAACAATCAAAGTTGTTGAAGGGGTGGCTAATGCTTCATACTATCTTCATCATGGATGCTCACCTCTAATAGTTCATCGTGACCTATGA 678 0.3717 MERLKGNKGLSICPTTNFDSSHSKSRKVVIYVVSFSLRAVMLATFFAGISYIIFHHKARKTESHKREVQTQNLFAIWSYDDGKLVYGNIIEATKEFIKKYLIRERGSGSVYKAELSTGQVVAVKKPHLGLDRDMCYHKAFMSEIRALIETRHHNIIKLYWFCWHAKVSFLVYEFLEGGNLDKILREETQAIALDWTKTIKVVEGVANASYYLHHGCSPLIVHRDL 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1605g00001 225 SUPERFAMILY Protein kinase-like (PK-like) 82 225 IPR011009 -
Pral1605g00001 225 Gene3D Phosphorylase Kinase; domain 1 55 174 - -
Pral1605g00001 225 PANTHER LEUCINE RICH REPEAT KINASE 2 3 225 - -
Pral1605g00001 225 FunFam Leucine-rich repeat receptor protein kinase MSP1 57 174 - -
Pral1605g00001 225 Pfam Protein tyrosine and serine/threonine kinase 108 225 IPR001245 GO:0004672|GO:0006468
Pral1605g00001 225 ProSiteProfiles Protein kinase domain profile. 96 225 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1605g00001 225 Gene3D Transferase(Phosphotransferase) domain 1 175 225 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1605g00001 Pral-Chr1605 40400 41077 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1605g00001 8 225 Receptor kinase-like Gene Family AT4G08850 42.081 4.89e-48 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral1605g00001 PK_Tyr_Ser-Thr 1.5e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1605g00001 - - qsa:O6P43_013160 227.254