Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1601g00001 ATGCTCCAAAAAGCTTTATTGATCCTATTGGGAGTATCAATTTCTAAAGCCATCAGACTCATCTCTCGTTCGCGTAATGGTAACCAACCTGTTGCTATTGCTGCTAGCTCTGAAGACGATGTTATTTTAACTTCTCCTCCTGCTACCAAGTATGATGTGTTCCTTAGCTTTAGAGGAGAAGACACTCGCCACAATTTTGCAAGTTATCTTTACAAAGGACTTCGAAATGCGGGCATTCACACTTTTATGGATCACGAACTTCGAAAAGGAGAATCAATCTCACCGATTCTTCAAAGAACAATAGGGGAATCAGAAATATCTGTGATTATTTTCTCTGAGAATTATGCTTCTTCAACTTGGTGTCTAGATGAGCTTGTTCACATATTAGAATGCAAGCGTAAATTTGGAAGGGTTGTGATACCTGTTTTCTATAACGTAGATCCTTCAAGCATACGCAAACAAAATGGGAATTTTGGAAAAGGATTTGATGTATTGGAGCAAAGATTTAAAGACAACCCAGAAGCATTGCAAAAGTGGAGAAATGCTTTAATCCAATCTACAAATCTCTCTGGATGGGATTCCCACAGTACAAGACCTGAATTCAAACTTATTGAAGAGATTGTCAAGGATATTTTGAGAAAGTTGAACTATACGTCATCATCTCATCTTGAAGGACTCATTGGTATTGCTCGACATGTTAGAAACATTCAGAGGCTTCTAATTGAGGCCCGCATTGTGGGAATACGGGGTATGGGCGGTGCTGGTAAGACCACACTTGCTAAAGCTATACTTCAGGAGTTGAAAGCTCAATTTGATGCTTTCTCCTTTATTGAAAATGTCAAAGAGCAATTAAAAAGGATTAGTTTGGATGAGCTACAGAAGAATTGCCTCAGAGAATTATTAAAAGATGAGGACATTAGCATCTATGACATAAAAACCACTTTTATGAAAAGTAGGCTTCAGAGAAAAAAAATTCTTCTTATACTTGATGATGTGGACAATTCAATAGTAGCGGCAGATTTAACCAAGGTACTTGATTGGTTTGGAGAAGGAAGTAGAATTATTATCACATCAAGGGACATGCAAGTGCTGAAGAATGCTTCAGCAGCATCTTCAACATATCACGTTCCGGATTTGGATTTTGAAGGTGCTTTTCATCTCTTCAATTTGAAAGCATTCAAGCGAGATGAGCCATCTAAAGGTTACATGGAGTTATCAAAATCAGTAGTGAAATATTGTCATGGAAACCCATTAGCCCTAGTAGTGCTGGGTTGCTTCCTCTATGGCAGACAAAAAGAAGAGTGGGAAAGTGCTTTGGAAAAACTAAATCAATCTCCACCCAAGGACATTGTTGATGTTTTGAAGTTGAGTTTCGATGGACTTGATGACAAACAGCAAAATGTGTTTCTTGACCTAGCATTCTTAATCAAGCAAGGAGTTCATTTTCTTTGA 1452 0.3802 MLQKALLILLGVSISKAIRLISRSRNGNQPVAIAASSEDDVILTSPPATKYDVFLSFRGEDTRHNFASYLYKGLRNAGIHTFMDHELRKGESISPILQRTIGESEISVIIFSENYASSTWCLDELVHILECKRKFGRVVIPVFYNVDPSSIRKQNGNFGKGFDVLEQRFKDNPEALQKWRNALIQSTNLSGWDSHSTRPEFKLIEEIVKDILRKLNYTSSSHLEGLIGIARHVRNIQRLLIEARIVGIRGMGGAGKTTLAKAILQELKAQFDAFSFIENVKEQLKRISLDELQKNCLRELLKDEDISIYDIKTTFMKSRLQRKKILLILDDVDNSIVAADLTKVLDWFGEGSRIIITSRDMQVLKNASAASSTYHVPDLDFEGAFHLFNLKAFKRDEPSKGYMELSKSVVKYCHGNPLALVVLGCFLYGRQKEEWESALEKLNQSPPKDIVDVLKLSFDGLDDKQQNVFLDLAFLIKQGVHFL 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1601g00001 483 Gene3D - 218 374 IPR027417 -
Pral1601g00001 483 Gene3D - 379 462 IPR042197 -
Pral1601g00001 483 SUPERFAMILY Toll/Interleukin receptor TIR domain 46 192 IPR035897 -
Pral1601g00001 483 Pfam TIR domain 50 223 IPR000157 GO:0007165
Pral1601g00001 483 FunFam Disease resistance protein (TIR-NBS-LRR class) 47 217 - -
Pral1601g00001 483 ProSiteProfiles TIR domain profile. 49 215 IPR000157 GO:0007165
Pral1601g00001 483 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 51 475 IPR044974 GO:0006952
Pral1601g00001 483 Gene3D - 47 217 IPR035897 -
Pral1601g00001 483 SMART till_3 50 189 IPR000157 GO:0007165
Pral1601g00001 483 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 216 472 IPR027417 -
Pral1601g00001 483 SMART AAA_5 242 382 IPR003593 GO:0016887
Pral1601g00001 483 PRINTS Disease resistance protein signature 413 427 - -
Pral1601g00001 483 PRINTS Disease resistance protein signature 245 260 - -
Pral1601g00001 483 PRINTS Disease resistance protein signature 319 333 - -
Pral1601g00001 483 Pfam NB-ARC domain 233 447 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1601g00001 Pral-Chr1601 826 4473 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1601g00001 51 473 WRKY Transcription Factor Family AT4G12020 29.767 3.39e-44 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1601g00001 - - pcin:129286024 630.943