Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral159g00007 ATGACAGATTGGAAGCTTCTCAACACTTTCGAGGAAGACTTGGAAGACTTTGAGACCAATTCTTTTTGTTCACCGGTGATTCTGCAATTCTGTGAGATTTTAGCGGCCATGGCTACAGCTGCATCAAACATCTACTTTCTTCTATTGGTATCTTTTCTATGTGGAAGGTTTGAAACAGGGCACGCAAATCAAATCATAAAGCTTGGCGCTTCCCTGTGTCCTGTTCGTCCCAGTTCATGGTCTTCACCTTCGGGTCAATTTTCATTTGGCTTTTATCATCAAGGGAATGGCTTCAAAGTTGGAATCTGGCTGTTCGATGGGATTAATAAAACAATCGTCTGGACCGCAAATCGTGATGACCCTCCTGTCTCCTCAAGTGCAAGGCTTGTTCTAACCATGCGAGGTGAGCTTCTTCTGCAAACAAGTCCAGGACAACAGAAGGTTATTGCCCATAGTAAGAATGGAACTGTTTCCTCTGCTTCCATGCTTGATTTTGGAAACTTTGTTCTACGCGACAAAAATTCCAACATCATTTGGCAGAGTTTCGATTATCCAACTGATACTATGTTAGGTGGTCAGCTTCTACCTAGTGGGAGTCAATTGGTGTCTAGTTCATCAGACACCAACCATTCTGCTGGAAGGTTTCAGCTCTCGATTCAGCATGATGGAAACCTTGCTCTGCGTTCCCGATATTCTGGTGACACAAGTTGGGATGCCTACTGGGCGTCTCAAACTAGGTACGATGATACTGTTTCCAAATATCAGCTTTTCCTCAACAACATAGGCCCTTATCCTCTTTGTATCGTTAATGTCACTGCTAGTTCCTACAACGAAGTCTGGCCAAAGGGTAAAATAGATGAGAATTATGATTTGTTTCCGAGTGACAACTTAACAAACATAGGCAAAATCATTTACCGTCTCACTCTCCATTCTGATGGCATTTTGCGGCTCTATGCTCATTTTGACAATGGCAAAGGGAAGCATCAAGTTGAAAAGTTATGGTCACCATCAATTTTGGACGATCTTTGTAATGTGAAGACTTTTTGTGGGTTCAACAGCTATTGTACCACCAATGACGACCAACCTTACTGCAACTGTATTCCTGGAACTGACTTCATAGATCCGAGTCAGACAAATCTTGGATGCAAAAGGAACTTCTCAGAAGCTGAATGCAGAGGTGGGGAAAATAATGCGGCTTTATATTCCATGTCTGCCATGAGTAGGATGGCCTGGGGCGATTCTCCTTACAGTGAGGAAGAAATTCAGGAGGAGCAATGCCAATCTTCTTGTTTGAAAGATTGTTATTGTGCAGCTGCACTATATGAATACGGCCGATGCAAGAAACAAAAGCTACCGCTGAGATATGTCAAAAGACAAACACGAGATCCTTCCTCCACCACCATCATCTACCGAAGCGGTTCCTTCACCGAGTACACCACAATATACTTCAAGGTGGGAAATCAAAGCCTCAAAAGCAACTATACACCCTCCACACACAAACCCATCAACACCACCAGTAAGAAAGCAATTGTGCAGATCATTGTCGTGGTCTTTGGTTTTGCTATTGTTTTGTGTTCAGTTATTGCAATCTCCGGCCGTTTAATTTACAAGATTGGTGTTTTAAGTTACCGAAGTTTGTTGGAGATGAGAGATTTGGGCTTGAACGAAGGGACTACTTTGAGGGTATTTTCATACAATGAGCTGAAGAAGGCAACCAATGGTTTCAAACAAGAGGCAGGTAGGGGTTCCTCCGGATCAGTTTACAGAGGAACTTTACGTGAAGGAAGAAAATTGATTGCTGTAAAAATGCTACACAGGTTAATTGATGAAGGGGAGAGAGAATTTCAAGCTGAAATGCAAGCTATTGGAAAAACCCACCACAAAAACTTAGTTCGCTTGCTGGGATATTGTGCTGAGGGATCTAAAAGGCTTCTAGTTTATGAGTACATGAGTAATGGCTCCCTTGAGAAGTTCATCTTTGGTGGCAGCACGGTACGTCCAGATTGGGATGAGAGAAGAAGAATAGCACTGGACATTGCGAGAGGCTTACTATATCTGCATGAACAATGCAGTGTTCCCATCATTCACTGTGACATAAAGCCTCAAAACATATTGATGGATGAGTTTTTGACAGCTAAAATATCAGATTTCGGGTTAGCCAAACTTTTAATGCCGGATCAAACAAGAACCTTCACTCAAGCTAGAGGGACAAGAGGTTATTTAGCTCCGGAATGGAGTAAGAACACTCCAATAACAGTAAAAGCAGATGTTTATAGCTATGGAATTATGTTATTGGAGATTGTATTTTGCAGAAGAAGCTTAGTGGTCAATGTGTCGAATCCGGAGCAAATTGTTCTGTCTAATTGGGTGTGCAAGTGCTTTGCTCGGCGAGAGTTAAACAAGCTGGTTGTAGGGGAAGAAGTGGATAATAATTTACTGGAAAATATGGTGAAAGTGGGGTTATGGTGTATTCAAGATGAACCTTTTCTTCGGCCATCAATGAAGAGTGTGGTGTTGATGCTTGAGGGAGTTACGGAAGTGGCTATTCCTCCTTGTCCATCTTCTGATTCTATTTGA 2577 0.423 MTDWKLLNTFEEDLEDFETNSFCSPVILQFCEILAAMATAASNIYFLLLVSFLCGRFETGHANQIIKLGASLCPVRPSSWSSPSGQFSFGFYHQGNGFKVGIWLFDGINKTIVWTANRDDPPVSSSARLVLTMRGELLLQTSPGQQKVIAHSKNGTVSSASMLDFGNFVLRDKNSNIIWQSFDYPTDTMLGGQLLPSGSQLVSSSSDTNHSAGRFQLSIQHDGNLALRSRYSGDTSWDAYWASQTRYDDTVSKYQLFLNNIGPYPLCIVNVTASSYNEVWPKGKIDENYDLFPSDNLTNIGKIIYRLTLHSDGILRLYAHFDNGKGKHQVEKLWSPSILDDLCNVKTFCGFNSYCTTNDDQPYCNCIPGTDFIDPSQTNLGCKRNFSEAECRGGENNAALYSMSAMSRMAWGDSPYSEEEIQEEQCQSSCLKDCYCAAALYEYGRCKKQKLPLRYVKRQTRDPSSTTIIYRSGSFTEYTTIYFKVGNQSLKSNYTPSTHKPINTTSKKAIVQIIVVVFGFAIVLCSVIAISGRLIYKIGVLSYRSLLEMRDLGLNEGTTLRVFSYNELKKATNGFKQEAGRGSSGSVYRGTLREGRKLIAVKMLHRLIDEGEREFQAEMQAIGKTHHKNLVRLLGYCAEGSKRLLVYEYMSNGSLEKFIFGGSTVRPDWDERRRIALDIARGLLYLHEQCSVPIIHCDIKPQNILMDEFLTAKISDFGLAKLLMPDQTRTFTQARGTRGYLAPEWSKNTPITVKADVYSYGIMLLEIVFCRRSLVVNVSNPEQIVLSNWVCKCFARRELNKLVVGEEVDNNLLENMVKVGLWCIQDEPFLRPSMKSVVLMLEGVTEVAIPPCPSSDSI 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral159g00007 858 SMART serkin_6 573 830 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral159g00007 858 ProSitePatterns Serine/Threonine protein kinases active-site signature. 694 706 IPR008271 GO:0004672|GO:0006468
Pral159g00007 858 Pfam Protein kinase domain 576 838 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral159g00007 858 FunFam S-receptor-like serine/threonine-protein kinase 546 649 - -
Pral159g00007 858 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 77 853 - -
Pral159g00007 858 ProSiteProfiles Protein kinase domain profile. 573 844 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral159g00007 858 CDD STKc_IRAK 580 843 - -
Pral159g00007 858 Gene3D - 185 337 IPR036426 -
Pral159g00007 858 ProSiteProfiles Bulb-type lectin domain profile. 63 183 IPR001480 -
Pral159g00007 858 CDD B_lectin 81 185 IPR001480 -
Pral159g00007 858 SMART blect_4 71 185 IPR001480 -
Pral159g00007 858 Pfam D-mannose binding lectin 111 193 IPR001480 -
Pral159g00007 858 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 650 849 - -
Pral159g00007 858 SUPERFAMILY alpha-D-mannose-specific plant lectins 111 245 IPR036426 -
Pral159g00007 858 PIRSF SRK 35 858 IPR024171 GO:0004674
Pral159g00007 858 Gene3D - 63 183 IPR036426 -
Pral159g00007 858 Gene3D Phosphorylase Kinase; domain 1 550 649 - -
Pral159g00007 858 Gene3D Transferase(Phosphotransferase) domain 1 650 848 - -
Pral159g00007 858 SUPERFAMILY Protein kinase-like (PK-like) 559 842 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral159g00007 Pral-Chr159 158850 161509 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral159g00007 549 853 Receptor kinase-like Gene Family AT1G66980 41.772 2.65e-66 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pral159g00007 Pkinase 5.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral159g00007 - - pcin:129309635 1028.85