Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral159g00006 ATGGCGGCTTCCCTAACTCTGTTCTTGCTCTTCGCAGTGCTACGTGCAAACCAAGCTATAGCTGAAAAGAATGATGCCACCATCATTCGTCTGGGCTCTTGGCTCTCCCCAAAATCAAATTCTACTTCATGGGTGTCAAGCTCTGGTCATTTCGCCTTCGGCTTTTATCCACAAGGTAAAGGCTTTGCTGTTGGGATATGGCTTAGGGATGAGCCTGAGAATACAATTGTATGGACGGCTTATCGCAACAGTCCACCACTATCATCTACATCAGTGATTGTCTTAGATAAAGATGGCCCAGTTCTGCTTCGTAACGAGACAGGGAAAAGAACACCCATTACTAATTCGTCGTTTAAAGTGCCTGCATATTCAGCTTCTATGTTTGATTCAGGCAATTTCGTGATTTACGATAAAAATCAAAGTGTTATCTGGCAAAGCTTCGATCTACACACCGATACCATATTAGGAGGTCAAATTCTATCTTCTGGGCAAAATCTGGTCTCTTCTTTGTCCAAATCCGACCACTCGAGCGGAAACTTCATTCTCGTCATGCAGGATGATGGGAATCTTGTGGCCTACCCTGTGAACAATCGAAGGATGGATGATGCTTACTATGGCACACAGATTTTTGGGTATGTCTTACTTACCCTTAATGTAAAAGGCTTTCTTTGCCTGGTTGATGATAGGAATAGGACCTTACGGGTTCTGGGCCATAGCAACGTTCATGGGCAGAACACAAGCCTAATCTACCGTGCAACACTTGATGTGGATGGGATATTTAGACTGTACGTGCACAGATTTGAGAGGAATGCCAAATCAAGTGTTCATATTGTGTGGCAGAATCTTTTTGATCAATGTGATGTAAGGGGTTTTTGTGGCTTCAACAGTTATTGCTCCTCGGTCGCTGGCAAAGGTGTATGTCATTGTTATCCTGGATTCACGCCCATCAATGGGAATCAAAGCATGTTCTTGGACTGTGAACAAACCCACAAATATGAATGTAAAACCAGTGAATATCCAAGGATGCTCTACAATTTTGATCCCTTGCAAGATTTGCAGCTGAAGAACATTGTTCCTTATTGGGTTGAGCCCATGAAAATGGAAACTTGCAGGCAGGCTTGCCAGGAAGACTGTGACTGTGCAGCAGTGTTATATGAAAGAGGTAACTGCAATAAGTTTAAGCTTCCCCTTAGATTTGGTAGAATTAAGCAAAATTCATCAAACACGGTATTCATCAAGTCACCTTCAGGAAACGCCATTATTCCAAATCCAGAGAAGCCAGCGATGATTCATGTTGATGACAAGAAAGATCTTATTTTGACTTTGCTCCTCACTCTGGGTTCAATTTCATTCCTTTGCTTCACTATTGCCACCTCCATCATCTTTGTTTACAGGCGCAAGATCCATTCATACACAAAGCTATCTACGAGTGCGAATCTGCGATTCACTGAGGACTGTAGTCTACGAACATTTTCTTTTGATGAATTGGTGAATGCAACAAGAAACTTCACAGAAGAGGTTGGTAGAGGATCTTTTGGAGTGGTCTACAAGGGGACAAATCAAGGAAATAACAAAAGGATAGCTGTGAAGAAACTAGACGTTGTTGCTGATGAAGGAGAAAGGGAATTTCAAGCTGAAATCACTGCAATTGCTCGAACTCATCACAGAAATCTAGTTCAGCTCATTGGTTATTGTATTGATGATTCAAGAAAGCTCCTTGTGTATGAATACATGAGTAATGGATCTCTAGCAGATTTTCTGTTCAAGTCTGAGATGCATCTATCTTGGAAACAAAGAGTCAAAATTGCATTGGATGTAGCAAGGGGAGTCCTATATCTGCACGAAGAGTGTGAAGTTTGCATCGTCCACTGCAATATCAAGCCTCAAAACATTCTCTTAGATGAAAGGTGGGTAGCAAAAATATCAGATTTTGGCCTTGCAAGGCTATCATCATTGCCAGAACATTCAAGAATGAGAAGTACCAGTGAATTGACAAGTGGCTATGTGGCACCTGAACGGCAGAAAGATGCATCAACATCGGTAAAAGTTGACATTTATAGCTATGGCGTGGTGCTGTTAGAGATCATATGTTGTAGAAGGAATATAGATGTGAATGTTCCTTCAGAAGAGGAGATTATGCTTTCAACTTGGGTATATAATTGCTTTGTTAGAGGGGAATTGAAGAAACTCGTATCAGTGGATGAAGATGTAGAATGGATGACATTGGAAAGAATGGTGAAAGTGGCTTTATGGTGCGTCCAAGAGGACTTATCCCTACGTCCTTCCATGAAGAATGTGATACTGATGTTGGAAGGGTTGAAACATATTCCAATTCCTTTGTCTCCAATCCCACTTGCTTCGTAA 2364 0.4162 MAASLTLFLLFAVLRANQAIAEKNDATIIRLGSWLSPKSNSTSWVSSSGHFAFGFYPQGKGFAVGIWLRDEPENTIVWTAYRNSPPLSSTSVIVLDKDGPVLLRNETGKRTPITNSSFKVPAYSASMFDSGNFVIYDKNQSVIWQSFDLHTDTILGGQILSSGQNLVSSLSKSDHSSGNFILVMQDDGNLVAYPVNNRRMDDAYYGTQIFGYVLLTLNVKGFLCLVDDRNRTLRVLGHSNVHGQNTSLIYRATLDVDGIFRLYVHRFERNAKSSVHIVWQNLFDQCDVRGFCGFNSYCSSVAGKGVCHCYPGFTPINGNQSMFLDCEQTHKYECKTSEYPRMLYNFDPLQDLQLKNIVPYWVEPMKMETCRQACQEDCDCAAVLYERGNCNKFKLPLRFGRIKQNSSNTVFIKSPSGNAIIPNPEKPAMIHVDDKKDLILTLLLTLGSISFLCFTIATSIIFVYRRKIHSYTKLSTSANLRFTEDCSLRTFSFDELVNATRNFTEEVGRGSFGVVYKGTNQGNNKRIAVKKLDVVADEGEREFQAEITAIARTHHRNLVQLIGYCIDDSRKLLVYEYMSNGSLADFLFKSEMHLSWKQRVKIALDVARGVLYLHEECEVCIVHCNIKPQNILLDERWVAKISDFGLARLSSLPEHSRMRSTSELTSGYVAPERQKDASTSVKVDIYSYGVVLLEIICCRRNIDVNVPSEEEIMLSTWVYNCFVRGELKKLVSVDEDVEWMTLERMVKVALWCVQEDLSLRPSMKNVILMLEGLKHIPIPLSPIPLAS 787
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral159g00006 787 PIRSF SRK 1 787 IPR024171 GO:0004674
Pral159g00006 787 ProSiteProfiles Protein kinase domain profile. 501 778 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral159g00006 787 FunFam S-receptor-like serine/threonine-protein kinase 470 577 - -
Pral159g00006 787 Pfam S-locus glycoprotein domain 245 315 IPR000858 GO:0048544
Pral159g00006 787 SUPERFAMILY Protein kinase-like (PK-like) 483 772 IPR011009 -
Pral159g00006 787 ProSiteProfiles Bulb-type lectin domain profile. 31 148 IPR001480 -
Pral159g00006 787 Pfam D-mannose binding lectin 75 159 IPR001480 -
Pral159g00006 787 CDD STKc_IRAK 507 773 - -
Pral159g00006 787 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 578 778 - -
Pral159g00006 787 SMART blect_4 35 150 IPR001480 -
Pral159g00006 787 Gene3D - 26 150 IPR036426 -
Pral159g00006 787 FunFam Serine/threonine-protein kinase 150 275 - -
Pral159g00006 787 ProSiteProfiles PAN/Apple domain profile. 334 415 IPR003609 -
Pral159g00006 787 Gene3D Transferase(Phosphotransferase) domain 1 578 777 - -
Pral159g00006 787 SUPERFAMILY alpha-D-mannose-specific plant lectins 173 263 IPR036426 -
Pral159g00006 787 ProSitePatterns Protein kinases ATP-binding region signature. 507 531 IPR017441 GO:0005524
Pral159g00006 787 Gene3D Phosphorylase Kinase; domain 1 464 577 - -
Pral159g00006 787 Gene3D - 151 283 IPR036426 -
Pral159g00006 787 SUPERFAMILY alpha-D-mannose-specific plant lectins 63 206 IPR036426 -
Pral159g00006 787 Pfam Protein kinase domain 504 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral159g00006 787 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 35 779 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral159g00006 Pral-Chr159 140905 143268 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral159g00006 483 777 Glycoside Hydrolase AT3G07070 40.264 2.02e-63 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pral159g00006 Pkinase 9.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral159g00006 - - aip:107630435 788.104