Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral159g00004 ATGGCTACCATTGCATCAAACATCTACTTTCTCTTTTTAGTATATTTTCTATGTCAGACAGTATTTACACAGTCCATATCACCTGGCTCTTTATTTTCCCCCACTGATCACCCCCCTTCGTGGCCTTCACCTTCAGGTCGATTTGCATTTGGCTTTTACAAGCAAGGCAATGGGTTCAAAGTTGGAATCTGGTTGCTGGATGGAATTAATAAAACAATCGTCTGGACTGCAAATCGCGATGACCCTCCTGTCTCCTCAAATGCAAGGCTCGTTGTAACCACAAATGACGGGGTTTTTCTGCAAACAGGTCCAAGGGAAAAGAAGGTTGTTGCTGATCCGGGGAATGTAACTGTTTCCTCTGCTTCCATGCTTGATTGTGGAAACTTTGTTCTCCAAGACGGAAATTCCAACATCCTTTGGCAGAGTTTCGACCACCCAACTGATACTCTGTTAGGAGGCCAAAAGCTATTTTCTTGGGGTCAATTGGTGTCTAGTTTATCAGACATCAACCATTCTTCTGGAAGGTTTCAACTCTGGATGCAGTATGATGGAAACCTTGTTCTGTACCCACGATATTCTGCTGCCACAGGTTTGGATGCTTACTGGGCCTCTGATACTGGTTCTGGCGGTGGTTCCAAATATTATTATCTTCTGCTCAACGGCACAGATACTCAGACTCTATGGATTGTGAATGCCAGTAGCTCCAACTCACAAATTATCTGGAGGATGCCTATCAACTTCAACTTCTCCAAAGGGAACAACGCTATTTGTCGTGCAACTATTGATTTTGATGGAGTTTTACGAATCTACGCTCATTTTGACGACGCACATCAGAAACATCAAGTTAAAAAGTTGTGGTCACGGTCAAAGTTGGACAATCTTTGTAATGTAAAGACTTTTTGTGGGTTCAACAGCTATTGTACCTCCAATGACAGCCAATCTTATTGCAATTGTCTTCCCGGAACTGATTATATAGACCCAAGTCATAAGAATCTGGGATGCAAAAGGAACTTCTCAGAAGCTGAATGTGAAGGTGGGAAAGATAATGCAACTTTTTATTTCATGTCCCCTCTTGAACATATGAGCGTGGATGGTGATCTTGACCATCCTTATACAGACGAAGACATTATGGAGAAGGAATGCCCAAATTCTTGTTTGCAAGATTGTTACTGTGGGGCTGCCTTTTATACAAACAATCGGTGCAACAAACATAAGCTTCCATTGAGATATGCCAGAAGAGAAAATCTATCCTCCTACTCCACAATATATTTCAAGGTGGGACATCAAAGCCTCAAAAGCAACAGAGACAACCAGCCACCTTCGATCAAGACTAACAGTAAGAAAGCAATTAAGATGATCATTCTCATTGTCTTGGGTTTTGCTATTCTTTTGTGTTCAGCAGTTGCTGTCGCTACCCGGTTTATATACAAGATTGGATTTTTAAGTTACAAGAGGTTGTTGGAGATTGGAGATTTAGGAGTGACCGAAGGGAGTACTCTGAGGGTATTTTCATACAGTGAGCTGAAGAAAGCCACACACGATTTCAAACAAGAGGTGGGTAAGGGTTCCTTCGGATCAGTTTACAGAGGAACTTTACACAAAGGAAGAAAATTGATTGCTGTGAAAATGCTACACAAGTCAATCGATGAAGGAGAGAGAGAACTTGAAGCTGAAATGCAAGCCATTGGGAAAACACAGCACAAAAACTTGGTTCGCTTGCTGGGATATTGTGCTGAGAGATCTAAAAGGCTTCTGGTTTATGAGTACATGAGCAATGGCTCCCTTGAGAAGCTTATCTTTGGTGACAGTACTATGCGTCCAGATTGGGATCAGAGAAGAAGAATAGCACTAGACATTGCAAGAGGGTTGCTATATCTGCATGAAGAATGCAGGGCTCCTATCATTCACTGTGACATAAAGCCTCAAAACATATTGATGGATGAGCTTTTCACAGCTAAAATATCTGACTTTGGGTTGGCCAAACTTCTGATGCCAGATCAAACAAGAACCTTCACTCAAGTTAGGGGCACAAGAGGCTATTTGGCTCCAGAATGGAATAAGAACACTCCAATAACAGTGAAAGCAGATGTTTATAGCTATGGAATAATGCTTTTGGAGATTGTTTTTTGCAGAAGAAGTATAGTGGTTAATATGTTGAATCCAGAACAAATTGTTCTGTCTAATTGGGTGTGCAAGTGCTTTGCTCGGCGAGAGTTAAACAAGCTGGTTGTAGGGGAAGAAGTGGATAATAATTTACTGGAGAATATGGTGAAAGTGGGGTTATGGTGTATTCAAGATGAACCTTTTCTTCGGCCATCAATGAAGAGTTTGGTGTTGATGCTTGAGGGAGTTACGGAAGTGGCTATTCCTCCTTGTCCATATTCTGATTCTATTTGCTAG 2400 0.4158 MATIASNIYFLFLVYFLCQTVFTQSISPGSLFSPTDHPPSWPSPSGRFAFGFYKQGNGFKVGIWLLDGINKTIVWTANRDDPPVSSNARLVVTTNDGVFLQTGPREKKVVADPGNVTVSSASMLDCGNFVLQDGNSNILWQSFDHPTDTLLGGQKLFSWGQLVSSLSDINHSSGRFQLWMQYDGNLVLYPRYSAATGLDAYWASDTGSGGGSKYYYLLLNGTDTQTLWIVNASSSNSQIIWRMPINFNFSKGNNAICRATIDFDGVLRIYAHFDDAHQKHQVKKLWSRSKLDNLCNVKTFCGFNSYCTSNDSQSYCNCLPGTDYIDPSHKNLGCKRNFSEAECEGGKDNATFYFMSPLEHMSVDGDLDHPYTDEDIMEKECPNSCLQDCYCGAAFYTNNRCNKHKLPLRYARRENLSSYSTIYFKVGHQSLKSNRDNQPPSIKTNSKKAIKMIILIVLGFAILLCSAVAVATRFIYKIGFLSYKRLLEIGDLGVTEGSTLRVFSYSELKKATHDFKQEVGKGSFGSVYRGTLHKGRKLIAVKMLHKSIDEGERELEAEMQAIGKTQHKNLVRLLGYCAERSKRLLVYEYMSNGSLEKLIFGDSTMRPDWDQRRRIALDIARGLLYLHEECRAPIIHCDIKPQNILMDELFTAKISDFGLAKLLMPDQTRTFTQVRGTRGYLAPEWNKNTPITVKADVYSYGIMLLEIVFCRRSIVVNMLNPEQIVLSNWVCKCFARRELNKLVVGEEVDNNLLENMVKVGLWCIQDEPFLRPSMKSLVLMLEGVTEVAIPPCPYSDSIC 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral159g00004 799 CDD B_lectin 43 146 IPR001480 -
Pral159g00004 799 SMART blect_4 23 146 IPR001480 -
Pral159g00004 799 Gene3D - 147 300 - -
Pral159g00004 799 ProSitePatterns Protein kinases ATP-binding region signature. 519 542 IPR017441 GO:0005524
Pral159g00004 799 CDD STKc_IRAK 519 783 - -
Pral159g00004 799 Pfam Protein kinase domain 516 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral159g00004 799 Gene3D Transferase(Phosphotransferase) domain 1 590 788 - -
Pral159g00004 799 FunFam S-receptor-like serine/threonine-protein kinase 488 589 - -
Pral159g00004 799 Gene3D - 20 145 IPR036426 -
Pral159g00004 799 Pfam D-mannose binding lectin 72 156 IPR001480 -
Pral159g00004 799 Gene3D Phosphorylase Kinase; domain 1 492 589 - -
Pral159g00004 799 SMART serkin_6 513 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral159g00004 799 Coils Coil 799 799 - -
Pral159g00004 799 SUPERFAMILY alpha-D-mannose-specific plant lectins 172 270 IPR036426 -
Pral159g00004 799 SUPERFAMILY Protein kinase-like (PK-like) 498 782 IPR011009 -
Pral159g00004 799 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 206 IPR036426 -
Pral159g00004 799 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 32 793 - -
Pral159g00004 799 ProSiteProfiles Bulb-type lectin domain profile. 23 144 IPR001480 -
Pral159g00004 799 ProSitePatterns Serine/Threonine protein kinases active-site signature. 634 646 IPR008271 GO:0004672|GO:0006468
Pral159g00004 799 PIRSF SRK 1 798 IPR024171 GO:0004674
Pral159g00004 799 ProSiteProfiles Protein kinase domain profile. 513 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral159g00004 799 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 590 789 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral159g00004 Pral-Chr159 82573 87474 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral159g00004 503 791 Receptor kinase-like Gene Family AT5G20050 41.748 9.90e-67 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pral159g00004 Pkinase 4.9e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral159g00004 - - pcin:129309635 1027.31