Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral159g00003 ATGGCGGCTTCCATAACTCTGTTCTTGCTCTTCGCAGTGCTTTCTGCAAACCAAGTTATAGCTGAAGCCAATGATCCCAGCATCATTCGTTTGGATTCTCGGCTCTCCCCAAAATCAAATTCCACTTCGTGGGTGTCACCCTCTGGTCATTTCGCCTTCGGCTTTTACCCACAAGGTAAAGGCTTTGTTGTTGGAATATGGCTGAGGCATGAACATGAGAATATAACTGTATGGACGGCTTATCGCAACAGTCCACCATTATCATCTAATTCTGTGATCGAGTTAACTACAGACGGCCTGGTTCTGTTTAACGAGACAGGGATAAGAACATCCATTACTAATGCGTCATTTGCAGTGCCTGCACATTCAGCGTCTATGCTTGATTCGGGCAATTTCGTGATTTATGATAAGAATCAAAGTGTTATCTGGCAAAGCTTCGATTTCCCCACCGACACCATGTTAGGAGGTCAAACTTTATCTCCTCAAAAAAATCTGGTCTCTTCTTTGTCCAAATCCGACCACTCGAGTGGAAACTTCATTCTCATCATGCAGGATGATGGGAATCTTGTGGCCTACCCTGTGAACAATCGAAGGAGCGATGATGCTTACTATGCCTCCATGATTTCTGGGAATGTCTCGCTTACTCTTAATCTTACGGGCTTTCTTTGCTTGGTTGATAGAAGCCATAATACTTCACGAGTTCTGGGCCATAGTAACATTACTGGGCATAACGAAAGCTTAGTCTACCGTGCAACACTTGATGTGGATGGGATATTTAGATTGTATGTGCACAGATTTGAGAGGAATGCCAAATCAACTGTCCATATTGTGTGGCATAATCTTTTTGATCAATGTGGTGTCTATGGTTTTTGTGGCTTCAACAGTTATTGTTCCTCCACCGCAGGCAAAGGTGTTTGTCATTGTTATCCTGGATTCATACCCATAAATGGGAGTAAGAGCATGTTCTTGGACTGCGAACAGAGGAGGAGCAAAGATGACTGTAAAACCAGTGACGATCCAAAGATGTTGTACGAAATTGTTGCCTTAGAAGATGTGCAATTGGGCCATTTTCCTTATTTGGTCCTACCATTATTGGAAATGAAAGACTGGGAGAAATCTTGCAGGGAAGACTGTGATTGTGGGGCTGCGTTATATGGTGATGGCAGTTGCCGCAAGTATAGGCTTCCCCTTGAATTTGGCAGACTTGATCATAGCTTTTCGACCACAGCCCTGTTCAAGTTGCCTTCATCAACAAATAACATTCCTTCAAATCCAAAGCCAAAGTTTCAGAATCTGACTTTTACTCTGGTCATCACTCTTGGTTCAATTTCCTTCCTTAGCTTAGCATTTGCAATATCTATTTTCTTCATCTACGTTCATAAAGCCTATTCATACACAAAGCTCTCTTCTAGTAGCGAAAATTTGGGGTTTGCTGAGGATTGTGGTTTACGAACATTTGCCTTTGATGAATTGGTGAACTCAACAGGAAATTTCGCAGAAGAGATTGGCAAAGGAACTTTTGGAGTGGTTTACAAGGGAACAATTCAAGGAAATAATAGAAGGATTGCTGTGAAGAGACTAAACAATATTGACGAAGGAGCAGAAAGAGAATTTCAAGCTGAAATCACTGCAATTGCTCGAACTCACCACAGAAATCTAGTTCAGCTCATTGGTTACTGCGTTGATGGTTCAAGAAAGCTTCTTGTTTATGAATATATGAGCAATGGGTCTCTAGCAGATTTTCTATTCAAGGCTGAGATGCATCTATCTTGGAAACAAAGAGTCAAAATTGCATTGGATGTAGCAAGGGGGCTCTTGTACCTTCATGAAGAATGTGAAGTTTGTATTGTCCACTGCAATATCAAGCTTCGTAACATTCTCTTGGATGAATTGTGGACAGCAAAAATATCTGATTTTGGCCTTGCAAAGCCATCAATGCCAGAACATTCAAGAGCCAGAGATACCAACGAATCAACAAGTCACTATGTGGCACCTGAACAGCAAAAACATGCATTGCCATCTGTTAAAGTTGACATTTATAGCTATGGCGTGGTGCTGCTAGAGATCATATGCTGCAGAAGGAATATAGACTTGAATGCTCCTTTAGAAGAGGAAATAATGCTTTCTAGTTGGGTATATAATTGCTTTGTGAGAGGGGAATGGCATAAATTGGTGTTAGATGAAGATGTGGAACGGAGGACATTGGAGAGAATGGTGAAGGTGGCCTTATGGTGTGTCCAAGAGGACTTATTTCTGCATCCTTCTATGAAGAATGTGATACTGATGTTGGAGGGGTTAAAAGATATCCCAATCCCTCCATCTCCAGTCCCACTTACTTGA 2340 0.4175 MAASITLFLLFAVLSANQVIAEANDPSIIRLDSRLSPKSNSTSWVSPSGHFAFGFYPQGKGFVVGIWLRHEHENITVWTAYRNSPPLSSNSVIELTTDGLVLFNETGIRTSITNASFAVPAHSASMLDSGNFVIYDKNQSVIWQSFDFPTDTMLGGQTLSPQKNLVSSLSKSDHSSGNFILIMQDDGNLVAYPVNNRRSDDAYYASMISGNVSLTLNLTGFLCLVDRSHNTSRVLGHSNITGHNESLVYRATLDVDGIFRLYVHRFERNAKSTVHIVWHNLFDQCGVYGFCGFNSYCSSTAGKGVCHCYPGFIPINGSKSMFLDCEQRRSKDDCKTSDDPKMLYEIVALEDVQLGHFPYLVLPLLEMKDWEKSCREDCDCGAALYGDGSCRKYRLPLEFGRLDHSFSTTALFKLPSSTNNIPSNPKPKFQNLTFTLVITLGSISFLSLAFAISIFFIYVHKAYSYTKLSSSSENLGFAEDCGLRTFAFDELVNSTGNFAEEIGKGTFGVVYKGTIQGNNRRIAVKRLNNIDEGAEREFQAEITAIARTHHRNLVQLIGYCVDGSRKLLVYEYMSNGSLADFLFKAEMHLSWKQRVKIALDVARGLLYLHEECEVCIVHCNIKLRNILLDELWTAKISDFGLAKPSMPEHSRARDTNESTSHYVAPEQQKHALPSVKVDIYSYGVVLLEIICCRRNIDLNAPLEEEIMLSSWVYNCFVRGEWHKLVLDEDVERRTLERMVKVALWCVQEDLFLHPSMKNVILMLEGLKDIPIPPSPVPLT 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral159g00003 779 Gene3D - 150 281 IPR036426 -
Pral159g00003 779 FunFam Serine/threonine-protein kinase 149 274 - -
Pral159g00003 779 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 35 774 - -
Pral159g00003 779 FunFam Putative receptor-like protein kinase 573 770 - -
Pral159g00003 779 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 192 IPR036426 -
Pral159g00003 779 Pfam Protein tyrosine and serine/threonine kinase 498 691 IPR001245 GO:0004672|GO:0006468
Pral159g00003 779 Pfam S-locus glycoprotein domain 243 314 IPR000858 GO:0048544
Pral159g00003 779 PIRSF SRK 1 779 IPR024171 GO:0004674
Pral159g00003 779 SUPERFAMILY Protein kinase-like (PK-like) 482 764 IPR011009 -
Pral159g00003 779 SMART blect_4 35 149 IPR001480 -
Pral159g00003 779 SUPERFAMILY alpha-D-mannose-specific plant lectins 171 262 IPR036426 -
Pral159g00003 779 ProSiteProfiles Bulb-type lectin domain profile. 31 147 IPR001480 -
Pral159g00003 779 Gene3D Transferase(Phosphotransferase) domain 1 573 771 - -
Pral159g00003 779 FunFam S-receptor-like serine/threonine-protein kinase 464 572 - -
Pral159g00003 779 ProSitePatterns Protein kinases ATP-binding region signature. 502 525 IPR017441 GO:0005524
Pral159g00003 779 Gene3D Phosphorylase Kinase; domain 1 482 572 - -
Pral159g00003 779 Pfam D-mannose binding lectin 76 162 IPR001480 -
Pral159g00003 779 Gene3D - 30 147 IPR036426 -
Pral159g00003 779 ProSiteProfiles Protein kinase domain profile. 496 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral159g00003 Pral-Chr159 76776 79115 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral159g00003 386 769 Receptor kinase-like Gene Family AT1G56120 36.224 2.46e-59 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pral159g00003 PK_Tyr_Ser-Thr 1.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral159g00003 - - jre:108996344 788.489