Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1595g00001 ATGAGTAGTTCGAACTATATGGAGATTGAAGGCTTTGATTTGAACAAAGTCTATGCTAATGCTGGAAATCATAGCAAGAGGGCTGATGATCTCATTGATAGAAGCAAAGTGAAAATATTGTTGTGCGATAATGATACCAAGAGTTCGGAAGAGGTTCTAACGCTTCTTTCGGGATGTTCTTATCAAGTTACTTCAGTAAGCTCTCCAAGGCAGGTAATTGATGTACTGAATGCAGAGGCGCAAGATATTGATGTCATACTAGCTGAAGTTGACCTTCCAATGAAGAAGGGCATGAAGATGTTGAAGTACATTGCACGAAACAAAGATTTGCATCGAATTCCTGTTATAATGACGTCAGCACACCATGAGGTATCCATTGTTATGAAGTGTTTGAGACTTGGAGCAGCAGACTATCTAATAAAGCCTTTACGCTCTAATGAACTATTAAATTTGTGGACACACATGTGGAGAAGGAGGCGCATGCTTGGTCTGACAGAGAAGAACATAATGAACTATAATTTTGATCTAGTGGCATCGGCCATAATGAACTATGATTCTGATCTGGTAGCATCAGACCCTGGAGATGGTAATACAACCAGTACCGCCTTGTTCTCAGATGATACAGAAGACAAGTCCAACAGGAGCACTAATCCGGAGGCAGGAATGTTAATCCAGCGGCAAGATGAGTCTAAAGGTGCTGCTGCTGATGCTCCTGAGAAGCCCCCGGCTGGCCATGCATCAGATTATTTGCTTGGTGTGCCTGGAATTAGTGATCACCAGACAAGGCACTGTTCTTCAGGACCAAAGAAGAGTGGACTAAGGATTGGGGAATCATCGGCCTTCTTTAGTTATGTTAAAACAACCATGCAAAAGAGCAACTTGGAAGGGATTCCTCAAGCTCAGAGTAACGCTGCTACGCAGCTGAGGATGGAAGACATGCATCAAACTTGTCCACGAGGGGTTTATGACCTTAAAACACATGAAAATAGAGTGCCAAGTGAGAGACCTAATAAAGATTATTTACCCAGCAGCATTAGTAATGCTGATTCTTTCTCCGTTGACAATTCTTCTGCTCCACCCGCTTCCATGGGAGCTCTAAATCAAAAGAACTTAAATGAACATTTACCACAGGATGTTATCTGTATCAGAAATGGAAGTCATATTCCTGAGACTGAAGTACCTGGTACTCCTTCCCATCATGCTCATCCACATTATATTTCAGGGTTCTTCAATCACCTTCTGATGCTATCCTCAGCGCCAATGTATCCTAAGAATCACCAGGACCAACAGAATCATGCTAGTTGGATAACTTCCTTGCCATATTACCCCATGACTATATGCTTACAACCTGGTCAGACGTCCTCAGCTCATTCACGGCCATCATTTGGAAGTTCAGGTTCATCCAAAGCAAAAGTGGATGTAGTTGATAGAAGAGCAGAAGCATTGATGAAGTTCAGAAAGAAAAGGAAAGAACGATGCTTTGATAAGAAAATTAGGTATGTCAATCGGAAGCAGCTTGCTGAAAGGCGACCTCGGGTGAGGGGACAGTTTGCGAAAAAGTTGAACGGAGTCAATGTTGATCTTAATGGACAACCTGCTTCCATTGATTATGATGAAGAGGAGGAGGAGGACGATGATGAAGAGAACAATGTGAGAGATTCATCTCCTGAAGATGCTCGAGAATGCAGAATCTCTGCTTTGAGCGAGGACCCTTAA 1716 0.4266 MSSSNYMEIEGFDLNKVYANAGNHSKRADDLIDRSKVKILLCDNDTKSSEEVLTLLSGCSYQVTSVSSPRQVIDVLNAEAQDIDVILAEVDLPMKKGMKMLKYIARNKDLHRIPVIMTSAHHEVSIVMKCLRLGAADYLIKPLRSNELLNLWTHMWRRRRMLGLTEKNIMNYNFDLVASAIMNYDSDLVASDPGDGNTTSTALFSDDTEDKSNRSTNPEAGMLIQRQDESKGAAADAPEKPPAGHASDYLLGVPGISDHQTRHCSSGPKKSGLRIGESSAFFSYVKTTMQKSNLEGIPQAQSNAATQLRMEDMHQTCPRGVYDLKTHENRVPSERPNKDYLPSSISNADSFSVDNSSAPPASMGALNQKNLNEHLPQDVICIRNGSHIPETEVPGTPSHHAHPHYISGFFNHLLMLSSAPMYPKNHQDQQNHASWITSLPYYPMTICLQPGQTSSAHSRPSFGSSGSSKAKVDVVDRRAEALMKFRKKRKERCFDKKIRYVNRKQLAERRPRVRGQFAKKLNGVNVDLNGQPASIDYDEEEEEDDDEENNVRDSSPEDARECRISALSEDP 571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1595g00001 571 ProSiteProfiles Response regulatory domain profile. 38 156 IPR001789 GO:0000160
Pral1595g00001 571 Pfam Response regulator receiver domain 39 150 IPR001789 GO:0000160
Pral1595g00001 571 SUPERFAMILY CheY-like 35 163 IPR011006 -
Pral1595g00001 571 PANTHER TWO-COMPONENT RESPONSE REGULATOR 37 265 IPR045279 GO:0009736
Pral1595g00001 571 MobiDBLite consensus disorder prediction 534 552 - -
Pral1595g00001 571 Pfam CCT motif 478 520 IPR010402 GO:0005515
Pral1595g00001 571 Gene3D - 37 240 - -
Pral1595g00001 571 SMART REC_2 37 152 IPR001789 GO:0000160
Pral1595g00001 571 MobiDBLite consensus disorder prediction 195 272 - -
Pral1595g00001 571 MobiDBLite consensus disorder prediction 553 571 - -
Pral1595g00001 571 ProSiteProfiles CCT domain profile. 478 520 IPR010402 GO:0005515
Pral1595g00001 571 MobiDBLite consensus disorder prediction 528 571 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1595g00001 Pral-Chr1595 1956 6263 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1595g00001 26 558 Response Regulator Gene Family AT5G61380 44.976 8.59e-150 442
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Pseudo ARR-B Pral1595g00001 Response_reg 1.1e-17 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1595g00001 K12127 - gmx:100799728 636.336