Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1586g00004 ATGAAACTTCATTTCTTTATCTTCCTCTCTATCATATCATTATCTCAATGCCCCGTGCCCCACGCGGCCAAGGGGACCAAAGCTATCAGCTTCAGAACTTTCGATGAAGCTCAATCAAGAAGAATTCTGCACCAACCGTTGTTCCCGGTGGGTTCTGCTCCACCACCAGCCGCCGTTGAGTCTCCGCCACCGCCCCCTCCGGACACCCCATCTTCTCCCGATATTCCTTTCTTCCACGAGAATCCAGTGGGACCAACGCCGGATCAGAATCAGCCACCTCCGGCGATTCCCAATGGCATGACAGTTCCGAATCCGACGGCAACAACATCGGCGAACAAGCCCACGAAGAAGGTCGCAATTGCCGTGTCTGTTGGAATTGTGACTCTTGGTATGCTCTCTGCTCTTGCCTTCTTCTTGTACAGACATCGTGTGAAGAACCCCGGTGAGACCCAGAAGCTTGTGGGTAGGAATTCGCAGGGCATTAACGAGGATTCTTCGGGGGCCCCACCGTCGAGTTTTCTGTACATTGGGACAGTGGAGCCGACACGAACGGAATCAGCGAGTGAGCCCGTTGAGACTAATGGAGGAAACAAGTCGCCTTATCATAAACTGAATCCTCCAAAGCGATCCGATCGGTACCGGCCAAGTCCTGAATTGCAGCCATTGCCGCCTCTAACAAGGCCGCCGGATGGCAATTACCCGCCGGCGGTTTCTTCGTCTTCTTCTTCTTCGTCTTCCGACGAGGAAAGCCACGACATGGCATTTCATACGCCGCACGGGTCATCGCTGAGCCACGAGGATGGCTATTATACACCAGTTTCGCGTCAGAGTTCTCTGGCTAACGGTAGCCCGACGGTTACTGCGAGGAGTGAGACTCATTCCACTAGTTCTCATCCTTTTTCAAAAAGGACATCACCAAAATCTCGCTTCACTGCTTCTTCGCCGGATGTGAGGCCTGTTATTATACCATCTATAAAGCAGGCTCCGCCTCCTCCTCCTCCTCCTCCGCCGCCGCCAATCCGATCAACACCATTTCAGCATCTAGACAAACAAGTGACCTCCGGTACTTCTAGAAGACCAAAATTCTCAGCGCCACCTCCGGCACCAAATTTGACGCATCTCCAGTCAACAGACTACACACCCCAGGACACGTCGAGGACTTCACTTAAATATCCTCATCCGCCGCCTCCTCCACCTCCTCCTCCTCCACCTCCACCTCCACCGCCGCCCCTGAAAACAACACCAATGAAAACAGTGTCGCCGGCAATTAGTGTTCCCTCATCTTCTGCTTCAAGAAACCAACAGTCTTGGTCTGCGAGTGAAGGAGCAGCTTCTGTTAAGAGTATAACAAAAGCCTCAGACTCTGAACATGTTGATGAAAGGCTTGCCTCTTCCCGGAGGATGGAAGCCGATGACATGGACGGAGGGAAACCCAGACTAAAGGCTCTGCATTGGGATAAAGTGCGTGCAACCTCAGATCGTGCTACAGTGTGGGACCAGCTAAAATCAAGCTCTTTTCAATTAAATGAGGACATGATGGAGAGCCTGTTTGGCTGCAATTCTACTACAAATGTTGTTCCAAAAGAACCTCCTAGAAAACTAGTTCTTCCTCCTGTTGTTAATCAGGAGGAGAAGGTACTGGACCCGAAGAAGTCACAGAACATTGCTATACTACTAAGGGCACTGAATGTTACAAGAGATGAAGTGTGCGAAGCTCTTTTGGACGGCAATCCTGAAGGTTTGGGTACTGAGCTATTTGAAACTCTAGTGAAGATGGCTCCTACTAAGGAGGAAGAGATAAAGCTTAAGAAGTATGATGGTGACCTTTCAAAACTTGGGTCTGCGGAAAGATTTCTTAAAGCAGTGCTTGATATCCCTTTTGCCTTCAAAAGAGTTGAAGCCTTGCTGTACAGATCTAACTTTGATACTGAAGTTAATTACCTGAGGAAGTCTTTTCAAACCCTCGAGGCAGCAAGTGGGGAATTGAAGAACAGTCGACTGTTCCTCAAACTCCTCGAAGCTGTTCTTAGGACAGGAAATAGAATGAATGTTGGCACCAATCGTGGTGATGCTAAAGCTTTTAAACTGGACACACTGCTAAAACTGGTGGACATAAAGGGAACCGATGGTAAGACTACATTGCTTCACTTTGTGGTCCAAGAGATCATTAGATCCGAAGATTCAGGCAATGATTCTGCAAATGAGAACGTTCAGAAGCAAAAGAATTCCAAATTCAATGAGGATGAGTTCAAGAAGCAAGGATTGCAGGTTGTGGCTGGACTAGGCAGAGACCTCAGCAATGTCAAGAAAGCAGCAACAATGGACTCAGATGTCTTGAGCAGCTATGTCACAAAGCTTGAAATGGGGCTTGAGAAAGTGAGATCTGTTTTCCAATATGAAAAATCAGACACGAAAGGGAATTTCTTCAACTCCATGAAGCTATTTTTGAGAGATGCTGAAGAGGAAATTGTTAGGATTAAGGATGACGAAAGAAAGGCTTTATTCCTTGTGAAGGAAGTTACAGAATACTTTCATGGGAATGCAGCAAAGGAAGAAGCCCACCCTTTCAGAATCTTCATGATTGTAAGGGACTTTCTAAATATCTTGGATCAAGTGTGCAAAGAAGTGGGAAGGATGCAGGATAGAATTATGGTCGGTGCTGCAAGATCTTTCAGGATAGCTTCTACTGCATCACTACCTGTTCTCAACAAGTACCATGCAAGACAAGATAGAAGTTCAGATGAAGAGAGTTCATCCCCATAG 2763 0.4759 MKLHFFIFLSIISLSQCPVPHAAKGTKAISFRTFDEAQSRRILHQPLFPVGSAPPPAAVESPPPPPPDTPSSPDIPFFHENPVGPTPDQNQPPPAIPNGMTVPNPTATTSANKPTKKVAIAVSVGIVTLGMLSALAFFLYRHRVKNPGETQKLVGRNSQGINEDSSGAPPSSFLYIGTVEPTRTESASEPVETNGGNKSPYHKLNPPKRSDRYRPSPELQPLPPLTRPPDGNYPPAVSSSSSSSSSDEESHDMAFHTPHGSSLSHEDGYYTPVSRQSSLANGSPTVTARSETHSTSSHPFSKRTSPKSRFTASSPDVRPVIIPSIKQAPPPPPPPPPPPIRSTPFQHLDKQVTSGTSRRPKFSAPPPAPNLTHLQSTDYTPQDTSRTSLKYPHPPPPPPPPPPPPPPPPPLKTTPMKTVSPAISVPSSSASRNQQSWSASEGAASVKSITKASDSEHVDERLASSRRMEADDMDGGKPRLKALHWDKVRATSDRATVWDQLKSSSFQLNEDMMESLFGCNSTTNVVPKEPPRKLVLPPVVNQEEKVLDPKKSQNIAILLRALNVTRDEVCEALLDGNPEGLGTELFETLVKMAPTKEEEIKLKKYDGDLSKLGSAERFLKAVLDIPFAFKRVEALLYRSNFDTEVNYLRKSFQTLEAASGELKNSRLFLKLLEAVLRTGNRMNVGTNRGDAKAFKLDTLLKLVDIKGTDGKTTLLHFVVQEIIRSEDSGNDSANENVQKQKNSKFNEDEFKKQGLQVVAGLGRDLSNVKKAATMDSDVLSSYVTKLEMGLEKVRSVFQYEKSDTKGNFFNSMKLFLRDAEEEIVRIKDDERKALFLVKEVTEYFHGNAAKEEAHPFRIFMIVRDFLNILDQVCKEVGRMQDRIMVGAARSFRIASTASLPVLNKYHARQDRSSDEESSSP 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1586g00004 920 MobiDBLite consensus disorder prediction 369 389 - -
Pral1586g00004 920 MobiDBLite consensus disorder prediction 452 476 - -
Pral1586g00004 920 MobiDBLite consensus disorder prediction 151 200 - -
Pral1586g00004 920 ProSiteProfiles Formin homology-2 (FH2) domain profile. 470 895 IPR015425 -
Pral1586g00004 920 Gene3D Formin, FH2 domain 479 894 IPR042201 -
Pral1586g00004 920 MobiDBLite consensus disorder prediction 417 451 - -
Pral1586g00004 920 PANTHER FORMIN-RELATED 367 914 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Pral1586g00004 920 MobiDBLite consensus disorder prediction 324 343 - -
Pral1586g00004 920 SMART it6_source 470 884 IPR015425 -
Pral1586g00004 920 MobiDBLite consensus disorder prediction 217 231 - -
Pral1586g00004 920 MobiDBLite consensus disorder prediction 390 415 - -
Pral1586g00004 920 MobiDBLite consensus disorder prediction 86 100 - -
Pral1586g00004 920 MobiDBLite consensus disorder prediction 267 312 - -
Pral1586g00004 920 Pfam Formin Homology 2 Domain 476 869 IPR015425 -
Pral1586g00004 920 MobiDBLite consensus disorder prediction 52 113 - -
Pral1586g00004 920 MobiDBLite consensus disorder prediction 150 476 - -
Pral1586g00004 920 MobiDBLite consensus disorder prediction 233 248 - -
Pral1586g00004 920 MobiDBLite consensus disorder prediction 346 360 - -
Pral1586g00004 920 MobiDBLite consensus disorder prediction 52 73 - -
Pral1586g00004 920 SUPERFAMILY Formin homology 2 domain (FH2 domain) 399 882 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1586g00004 Pral-Chr1586 25819 29843 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1586g00004 456 910 FH2 protein (formin) Gene Family AT5G67470 71.678 0.0 642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1586g00004 - - pcin:129322910 1177.93