Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1586g00003 ATGGATGCTCAGAATTTAAGTCCCGTATCGCCTCCCCCTTTTCCTGGGTCGGCGTCGACGAGTTCCACATGCAAGAAAATGTTGATGAACAATTTAAAGCCTAGAAGGTGCAGCTATGTGTCCACAGCAACAAGAGATTTATGGGATCGTCTATTCGATAAAGGCTATAAAGCAGATGTTTGCATTAATACTCACAATGGTGGTATTCTCTTTGCTCATTCTAACGTTCTTGGGATGGCTTCTCCAGTATTGAGAGGCGTGCTTCAGCGTCAGCGATCAATCTCCATTCTTGGGGTTCCACATGATGCTGTCCGAGTTTTTATTAGATTCCTGTATTCATCCTGCTACGAGAAAGAAGAAATGGAGGAATTGGTGTTGCCTTTGTTGGTGCTGTCACATGCATTTGTTGTACCTCACTTGAAGCGTGAATGTGAAGAGAAGCTAGAGATGAGTTCACTCACCATAGACAACGTAGTTGACGTATTTCAGCTTGCATTGCTATGCGATGCTCCACGGCTGAGCCTAATTTGTTACCGGTTGATCTCAAAGAATCTCAAACCTGTTTCAGAGCCTGAAGGTTGGAGGGCAATGAAGCAGAGTCACCCATTTATGGAAACCGAAATTCTGCAACATATGGCTGTGGAAGAAAATAGAAAGAGGATGAGGAAGAGGAAGAGTGAAGAAAGGAAGATGTATATGGAACTGTACGAGGCAATGCAGGCACTGGTTCACATCTGTAGAGATGGGTGTCGAACAATTGGTCCACACGATAAAGATTTAAAAGCAAAGGAGGCTCCTGTGCATTATTTTGCCTGCAAGGGGATAGAATTGCTTATTCGTCATTTTGTTGCTTGTAAATTAAGGGTCCCACGTGGTTGCATGCATTGTACGAGAATGTGGCAATTATTGCAGTTACATTCTCGACTATGCGGCCATCCCCACACCTGTAAAGTTCCTTTATGCAGGAGCTTCAAGCAAAAATTATCGAATCAAAGAAAGAAAGATGAGATGAAGTGGAAAACATTGGTTCAAAAGATTTTGAGAACAAAGGGTATTGCCGTGGCGCCGATTTTTCAACAGCAATAG 1086 0.4319 MDAQNLSPVSPPPFPGSASTSSTCKKMLMNNLKPRRCSYVSTATRDLWDRLFDKGYKADVCINTHNGGILFAHSNVLGMASPVLRGVLQRQRSISILGVPHDAVRVFIRFLYSSCYEKEEMEELVLPLLVLSHAFVVPHLKRECEEKLEMSSLTIDNVVDVFQLALLCDAPRLSLICYRLISKNLKPVSEPEGWRAMKQSHPFMETEILQHMAVEENRKRMRKRKSEERKMYMELYEAMQALVHICRDGCRTIGPHDKDLKAKEAPVHYFACKGIELLIRHFVACKLRVPRGCMHCTRMWQLLQLHSRLCGHPHTCKVPLCRSFKQKLSNQRKKDEMKWKTLVQKILRTKGIAVAPIFQQQ 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1586g00003 361 SMART BTB_4 58 152 IPR000210 GO:0005515
Pral1586g00003 361 Gene3D TAZ domain 225 350 IPR035898 -
Pral1586g00003 361 MobiDBLite consensus disorder prediction 1 21 - -
Pral1586g00003 361 SUPERFAMILY POZ domain 35 148 IPR011333 -
Pral1586g00003 361 SUPERFAMILY TAZ domain 227 326 IPR035898 -
Pral1586g00003 361 Gene3D - 153 224 - -
Pral1586g00003 361 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 25 355 IPR044513 -
Pral1586g00003 361 FunFam BTB/POZ and TAZ domain-containing protein 2 226 351 - -
Pral1586g00003 361 Gene3D Potassium Channel Kv1.1; Chain A 36 152 IPR011333 -
Pral1586g00003 361 ProSiteProfiles BTB domain profile. 58 120 IPR000210 GO:0005515
Pral1586g00003 361 SMART TAZ_2 229 322 IPR000197 -
Pral1586g00003 361 FunFam BTB/POZ and TAZ domain-containing protein 2 154 224 - -
Pral1586g00003 361 Pfam BTB/POZ domain 50 150 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1586g00003 Pral-Chr1586 16098 25474 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Pral1586g00003 BTB 1.8e-08 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1586g00003 - - qsa:O6P43_033903 477.248