Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1584g00015 ATGGGTATAGATAGCGTCGGTTGTGCAGCACTGCCAAAGCTGCGCATATTTGCAGAAGATTACCTCTATGGAATTTATAAAGGATTTCGCCAAATAGTGAAGATGACTACTTACGGTCACTATAGTGACTATGATTTTAGTCTAACAAATCTTGCAATCACATTAGGAATAGCGACTGGAAGAGTTGTTTTGCCAATCATCACAACCAGATTTTTATTTGGCATCATATTCCTATCTGCGCTATTGCTTTATAAATGCCATAGGAGACATTTATCAATATATGAAGACATCGAAGATTTTATACGACTTCATAACCTCATTCCAATAAGGTACTCTTACAAGGATTTGAAGACAATGACCCAAGGTTTCAAGAATAAGTTAGGTGAAGGTGGCTTTGGCACTGTTTACAGAGGGAAGCTAAGGAGCGGACCCGAAGTTGCCATCAAAATATTGGGCAAATCCAAAGCTGATGGCCAAGAATTTATCAGTGAAGTGGCAACACTTGGGAGGATACATCATTTTAATGTGGTACATCTTGTTGGTTTTTGTCTTGAAGGAACAAATCGTGCTCTTATATACGAATTCATGTCCAGAGGGTCTTTGGACAAATATATTTTTTCTAAAGAAGAAAGCATCTCCTTGAGTTATCACAAAATATATGAGATATCTTTAGGGGTGGCTCATGGAATTGCTTATCTTCATCGTGGTTGTGACATGCAAATATTGCATTTTGACATCAAACCTCATAACATTCTTCTTGATGATAGCTTTACTCCAAAGATTTCGGATTTTGGGCTGGCAAGATTATATGCTGTTGATGATAGTGTTGTCACTTTGACTGCAGCGAGAGGTACAATAGGATACATGGCTCCTGAATTGTTCTACAAGAATATTGGAGGAGTGTCTTCTAAGGCAGATGTTTATAGTTTTGGAATGCTTTTAATGGAAATGGCCGGTAGAAGAAGAAACTTGAACCCACATGCAGAATGTTCAAGCCAACTTTACTTTCCCTTGTGGATTTATGATCAGCTGGATGATGATAAAGATATAGAAATGGAGGATTTGACAAAAGAAGAAAAGGATTTAGCAAAGAAAATGATCATAATAGCACTCTGGTGTATACAGCTAAAACCTATTGATCGTCCTTCAATGAGCAAAGTGATAGAAATGTTAGAAGCAAATGATGTGGAAAGTCTTGAAATGCCCCCAAAACCTTCCCTGTACCCAAATGAGACAGTTTTAGCGGATCACATGTCCGACACTGACCAAACAATATCCACTACTCCTGGACATTCTCATAACAATCTGGGTGAGGGCACAAGTAATGGAAATTAA 1335 0.3813 MGIDSVGCAALPKLRIFAEDYLYGIYKGFRQIVKMTTYGHYSDYDFSLTNLAITLGIATGRVVLPIITTRFLFGIIFLSALLLYKCHRRHLSIYEDIEDFIRLHNLIPIRYSYKDLKTMTQGFKNKLGEGGFGTVYRGKLRSGPEVAIKILGKSKADGQEFISEVATLGRIHHFNVVHLVGFCLEGTNRALIYEFMSRGSLDKYIFSKEESISLSYHKIYEISLGVAHGIAYLHRGCDMQILHFDIKPHNILLDDSFTPKISDFGLARLYAVDDSVVTLTAARGTIGYMAPELFYKNIGGVSSKADVYSFGMLLMEMAGRRRNLNPHAECSSQLYFPLWIYDQLDDDKDIEMEDLTKEEKDLAKKMIIIALWCIQLKPIDRPSMSKVIEMLEANDVESLEMPPKPSLYPNETVLADHMSDTDQTISTTPGHSHNNLGEGTSNGN 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1584g00015 444 FunFam serine/threonine-protein kinase PBS1-like 93 195 - -
Pral1584g00015 444 ProSitePatterns Serine/Threonine protein kinases active-site signature. 241 253 IPR008271 GO:0004672|GO:0006468
Pral1584g00015 444 Gene3D Phosphorylase Kinase; domain 1 98 195 - -
Pral1584g00015 444 Gene3D Transferase(Phosphotransferase) domain 1 196 401 - -
Pral1584g00015 444 ProSiteProfiles Protein kinase domain profile. 121 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1584g00015 444 FunFam PR5-like receptor kinase 196 403 - -
Pral1584g00015 444 SMART serkin_6 123 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1584g00015 444 PANTHER RUST RESISTANCE KINASE LR10-RELATED 94 413 IPR045874 GO:0004672
Pral1584g00015 444 Pfam Protein kinase domain 124 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1584g00015 444 MobiDBLite consensus disorder prediction 421 444 - -
Pral1584g00015 444 ProSitePatterns Protein kinases ATP-binding region signature. 127 149 IPR017441 GO:0005524
Pral1584g00015 444 SUPERFAMILY Protein kinase-like (PK-like) 106 392 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1584g00015 Pral-Chr1584 228527 232122 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1584g00015 110 424 Receptor kinase-like Gene Family AT5G38280 48.125 2.59e-105 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral1584g00015 PK_Tyr_Ser-Thr 1.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1584g00015 - - pcin:129321062 568.155