Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1584g00014 ATGGGTATAGATAGCGTCGGTTGTGCACTGCCAAAGCTGCGCATATTTGCAGAAGATTACCTCTATGGAATTTATAAAGGATTTCGCCAAATAGTGAAGATGACTACTTACGGTCACTATAGTGACTATGATTTTAGTCTAACAAATCTTGCAATCACATTAGGAATAGCGACTGGAAGAGTTGTTTTGCCAATCATCACAACCAGATTTTTATTTGGCATCATATTCCTATCTGCGCTATTGCTTTATAAATGCCATAGGAGACATTTATCAATATATGAAGACATCGAAGATTTTATACGACTTCATAACCTCATTCCAATAAGGTACTCTTACAAGGATTTGAAGACAATGACCCAAGGTTTCAAGAATAAGTTAGGTGAAGGTGGCTTTGGCACTGTTTACAGAGGGAAGCTAAGGAGCGGACCCGAAGTTGCCATCAAAATATTGGGCAAATCCAAAGCTGATGGCCAAGAATTTATCAGTGAAGTGGCAACACTTGGGAGGATACATCATTTTAATGTGGTACATCTTGTTGGTTTTTGTCTTGAAGGAACAAATCGTGCTCTTATATACGAATTCATGTCCAGAGGGTCTTTGGACAAATATATTTTTTCTAAAGAAGAAAGCATCTCCTTGAGTTATCACAAAATATATGAGATATCTTTAGGGGTGGCTCATGGAATTGCTTATCTTCATCGTGGTTGTGACATGCAAATATTGCATTTTGACATCAAACCTCATAACATTCTTCTTGATGATAGCTTTACTCCAAAGATTTCGGATTTTGGGCTGGCAAGATTATATGCTGTTGATGATAGTGTTGTCACTTTGACTGCAGCGAGAGGTACAATAGGATACATGGCTCCTGAATTGTTCTACAAGAATATTGGAGGAGTGTCTTCTAAGGCAGATGTTTATAGTTTTGGAATGCTTTTAATGGAAATGGCCGGTAGAAGAAGAAACTTGAACCCACATGCAGAATGTTCAAGCCAACTTTACTTTCCCTTGTGGATTTATGATCAGCTGGATGATGATAAAGATATAGAAATGGAGGATTTGACAAAAGAAGAAAAGGATTTAGCAAAGAAAATGATCATAATAGCACTCTGGTGTATACAGCTAAAACCTATTGATCGTCCTTCAATGAGCAAAGTGATAGAAATGTTAGAAGCAAATGATGTGGAAAGTCTTGAAATGCCCCCAAAACCTTCCCTGTACCCAAATGAGACAGTTTTAGCGGATCACATGTCCGACACTGACCAAACAATATCCACTACTCCTGGACATTCTCATAACAATCTGGGTGAGGGCACAAGTAATGGAAATTAA 1332 0.3806 MGIDSVGCALPKLRIFAEDYLYGIYKGFRQIVKMTTYGHYSDYDFSLTNLAITLGIATGRVVLPIITTRFLFGIIFLSALLLYKCHRRHLSIYEDIEDFIRLHNLIPIRYSYKDLKTMTQGFKNKLGEGGFGTVYRGKLRSGPEVAIKILGKSKADGQEFISEVATLGRIHHFNVVHLVGFCLEGTNRALIYEFMSRGSLDKYIFSKEESISLSYHKIYEISLGVAHGIAYLHRGCDMQILHFDIKPHNILLDDSFTPKISDFGLARLYAVDDSVVTLTAARGTIGYMAPELFYKNIGGVSSKADVYSFGMLLMEMAGRRRNLNPHAECSSQLYFPLWIYDQLDDDKDIEMEDLTKEEKDLAKKMIIIALWCIQLKPIDRPSMSKVIEMLEANDVESLEMPPKPSLYPNETVLADHMSDTDQTISTTPGHSHNNLGEGTSNGN 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1584g00014 443 Pfam Protein kinase domain 123 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1584g00014 443 ProSiteProfiles Protein kinase domain profile. 120 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1584g00014 443 Gene3D Transferase(Phosphotransferase) domain 1 195 400 - -
Pral1584g00014 443 Gene3D Phosphorylase Kinase; domain 1 97 194 - -
Pral1584g00014 443 ProSitePatterns Serine/Threonine protein kinases active-site signature. 240 252 IPR008271 GO:0004672|GO:0006468
Pral1584g00014 443 SMART serkin_6 122 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1584g00014 443 MobiDBLite consensus disorder prediction 420 443 - -
Pral1584g00014 443 FunFam serine/threonine-protein kinase PBS1-like 92 194 - -
Pral1584g00014 443 FunFam PR5-like receptor kinase 195 402 - -
Pral1584g00014 443 ProSitePatterns Protein kinases ATP-binding region signature. 126 148 IPR017441 GO:0005524
Pral1584g00014 443 SUPERFAMILY Protein kinase-like (PK-like) 105 391 IPR011009 -
Pral1584g00014 443 PANTHER RUST RESISTANCE KINASE LR10-RELATED 93 412 IPR045874 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1584g00014 Pral-Chr1584 228527 232323 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1584g00014 109 423 Receptor kinase-like Gene Family AT5G38280 48.125 2.45e-105 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral1584g00014 PK_Tyr_Ser-Thr 1.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1584g00014 - - pcin:129321062 565.844