Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1584g00013 ATGGAGAGAGAGAAAGGCTTAAGGTGGTGGGATTCTGTGTTGCTTGCACTGCTTCTAACATATGGACTTGCGAGCTCCCAAGAGCAGAGCAAGTCCTGTGCTCCGTCTCAGTGCGGCATTATCACAAACATCAGACATCCATTTCGACTACGAGATGACCCGCCCGGCTGCGGTGATCCAATCTATGAGCTAGCCTGTGAAAACAACATAACTCTGCTTCATCTGAATTCAGCAACATATAGAGTGCTGGGAATTGACCACAGCAACTTCACAATCCGACTCGTAGATCCTGGAATTCAGGAGGGAAATTGCTCTTCCCTCCCTCACTATCTCTTATCCTTATCCAATTTCACTGATAGTCATAGCCGTAACCCCTATGACGCTATTTTGACATACAAACAATTTACATTCAAGCACGTAGTGTACCTAAAGTGTAGAGATCCAGTGAGGGACGACGTAGCATACCTGGACACAGCTCCCTGTGTGAAGTGGGAAGGAAAAAGTCATGTTTATGCTGTGGCTGGAGACCTGTCGGCTTACCAGTTAAAATCTCAGTGTCGTGTGAAATCAGTGGCCACCATAGCCTCTGATTGGGAGTCAATAGGAGATCAAAGAAAAAAGTCCTACACTGATATTCACATAGCGCTTTCCTCTGGATTTGAGCTTTCATGGTGGCGACGAGCTTGCATTGATTTTAAATGCCCAAGTGATCGTAAATGCTCTTTAGACCCTAAAACAACAAGTCTTGTGCCATACATGATACTCAGATTTTCAATGGGGGTGCTACTACTATCCATATTGTTGATTTATAAATACCGGAGAAGGCACATGTCAATGTTTGAGAACATTGAAGATTTTATAAGACTTCAAAACCTTATTCCAATAAGGTACTCCTACAAGGAATTAAGAGCAATGACAGAGGGTTTTAAGATTAAGTTAGGCGAAGGAGGCTTTGGAACTGTATACAAAGGGAAGCTAAGAAGTGGATCTTATGTTGCTATTAAAATGTTGGGCAAATCCAAAGCCAATTGCCAAGAATTCATTAGTGAAGTTGCAACCATTGGGAGGATACACCATTTCAATGTGGTTCATCTTGTTGGGTTTTGTGTGGAAGGAACTAAGCGTGCTCTTGTTTATGAATATATGTCGAATGGATCTTTGGATAAATATATTTTTCCCAAGAAAGAAAGCGTCTCCTTGAGTTTTCATCGGATATATGAGATTTCTCTGGGAGTGGCTCGTGGAATACCTTACCTTCACCATGGATGCGATATGCAGATATTGCATTTTGATATTAAGCCCCATAATATTCTTCTTGATGATAATTTTAGTCCAAAAATTTCAGATTTTGGACTGGCAAGATTATATTCTGTTGGTGATAGTATTGTAACTTTAACCGCAGCAAGAGGAACAATAGGGTATATGGCTCCTGAATTATTTTACAAGAATATTGGAGGAGTTTCTCACAAGGCTGATGTTTATAGTTTTGGAATGCTTTTGATGGAAATGGCAAGCCGAAGAAGGAATTTGAATTCACATGTAGAACATTCAAGCCAACTTTACTTTCCTTTGTGGATTTATGATCACTTTGATGATGATAAAGATATTGGAATGGAAGATTTGACAGAAGAAGAAAAGGATTTAGCAAAGAAAATGTTCATAGTAGCACTCTGGTGTATACAACTAAAACCTGCGGATCGTCCTTCAATGAACAAAGTGATAGAAATGTTAGAAGCAAATGATGTTAGAAGTCTTGAAATGCCTTCAAAACCTTCTTTATATCCTAACGAGACTGTTTTTGTGGATCACATGTCCAGCTCAAGCCAAACAACATCCACTATTCATGGACATTCTCATAGCAATCTTGCTAGGTGA 1875 0.4005 MEREKGLRWWDSVLLALLLTYGLASSQEQSKSCAPSQCGIITNIRHPFRLRDDPPGCGDPIYELACENNITLLHLNSATYRVLGIDHSNFTIRLVDPGIQEGNCSSLPHYLLSLSNFTDSHSRNPYDAILTYKQFTFKHVVYLKCRDPVRDDVAYLDTAPCVKWEGKSHVYAVAGDLSAYQLKSQCRVKSVATIASDWESIGDQRKKSYTDIHIALSSGFELSWWRRACIDFKCPSDRKCSLDPKTTSLVPYMILRFSMGVLLLSILLIYKYRRRHMSMFENIEDFIRLQNLIPIRYSYKELRAMTEGFKIKLGEGGFGTVYKGKLRSGSYVAIKMLGKSKANCQEFISEVATIGRIHHFNVVHLVGFCVEGTKRALVYEYMSNGSLDKYIFPKKESVSLSFHRIYEISLGVARGIPYLHHGCDMQILHFDIKPHNILLDDNFSPKISDFGLARLYSVGDSIVTLTAARGTIGYMAPELFYKNIGGVSHKADVYSFGMLLMEMASRRRNLNSHVEHSSQLYFPLWIYDHFDDDKDIGMEDLTEEEKDLAKKMFIVALWCIQLKPADRPSMNKVIEMLEANDVRSLEMPSKPSLYPNETVFVDHMSSSSQTTSTIHGHSHSNLAR 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1584g00013 624 FunFam PR5-like receptor kinase 382 589 - -
Pral1584g00013 624 FunFam serine/threonine-protein kinase PBS1-like 276 381 - -
Pral1584g00013 624 PANTHER RUST RESISTANCE KINASE LR10-RELATED 278 604 IPR045874 GO:0004672
Pral1584g00013 624 ProSitePatterns Protein kinases ATP-binding region signature. 313 335 IPR017441 GO:0005524
Pral1584g00013 624 ProSitePatterns Serine/Threonine protein kinases active-site signature. 427 439 IPR008271 GO:0004672|GO:0006468
Pral1584g00013 624 SMART serkin_6 307 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1584g00013 624 Pfam Protein kinase domain 312 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1584g00013 624 ProSiteProfiles Protein kinase domain profile. 307 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1584g00013 624 Gene3D Phosphorylase Kinase; domain 1 271 381 - -
Pral1584g00013 624 SUPERFAMILY Protein kinase-like (PK-like) 292 578 IPR011009 -
Pral1584g00013 624 Gene3D Transferase(Phosphotransferase) domain 1 382 589 - -
Pral1584g00013 624 MobiDBLite consensus disorder prediction 605 624 - -
Pral1584g00013 624 Pfam Wall-associated receptor kinase galacturonan-binding 33 96 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1584g00013 Pral-Chr1584 216229 220254 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1584g00013 33 612 Receptor kinase-like Gene Family AT1G66910 36.926 3.62e-114 354
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral1584g00013 Pkinase 2.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1584g00013 - - gmx:100305358 685.256