Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1584g00008 ATGTTTTCGCATCGCAGATTTTGGTTGTTGGTGATATTGCAGGTATGGGTGCGCCTTCTGAAACAAGGGAATGGTAAGAACCACCAGCAGGTGCCTCATAATGAAACTCTTCCTTTCCGTCTCAAAGAAGATGGGGACATGGTTGAGTTTCCGTCTATTCATGCTCTTCAAGGAGTCAGTCTCTCTGTCTCTGATATAAACAATGAATCCCATATCTTAGAAGTAAAGGATCCAGAACAATGTCTTCCCATGCTCTTTCTCCAAAACCATCTCTATAATTCATCCAGTATTTATCCTCTAGAGTATGATACTGACAATATGACCGAAAATATTACTTTCTTCGATTGTTCTTCGGCTACTTCGGAATATACGCCCAAGTCCTGCCCAATTCTTGCCCTTGGCTCCCATGACAGTGTCCTGTCCGGGGACCTACTTTCCTGCGCCATGAGAATTCGGTTAGATTCGCCCATACCGGCAGAGCATCTTCAGGGGAACCGGTTACGACTCAAATGGATTCAACAAAAAGTTGATAAGCATAAAACCAGCAAGATGCCCAGAATTGTTTTGCCCGGAACAGGTTCGATTGTGCTGGTTTTGCTGTTGGTCGTGTGCGTTTACACATGTCGCTACTTCAAGAAGAAAGGAGATGATCAAGCAAGACTTGAAAAGTTTTTGAAGAATTACGAGGCACTTAAACCTACCAGATTCTCTTTCGCTGATATCAAAAGAATCACACACAGTTTCAAGGATAAATTAGGTGAAGGTTCTCACGGAACAGTCTTTAAAGGTAAGCTATCTGCTAAAATTCAAGTTGCTGTCAAAGTACTCAATAATTCAGATAATGATGGAAAGGATTTCATTAATGAAATGGGGACAATGGGCCAAATTCATCACATCAATGTTGTTCGTTTGTTGGGATTTTGTGCTGATGGTTTTCATCGAGCTCTTGTTTATGACTTTTTCCCAAACGGCTCCCTCCAAAAGTTCATATTTTCCCAAGATAACAGAGAAAATTTCCTCGGGTGGTCGAAGCTGCAACAGATTGCTCTTGGCATCGCAAAGGGGATTGAATATCTTCACCAAGGCTGTGATTATAGAATTCTCCATTTTGATATCAATCCTCACAATGTGTTGTTAGATGACAAGTTCACCCCTAAAATTTCTGATTTTGGTCTAGCTAAATTGTGTTCTAAAAATCAAAGTATGGTGTCAATGACAGTAGCAAGAGGAACTTTAGGATACATTGCACCTGAAGTCTTTTTTCCAAATTTTGGCCATGTGTCATACAAATCAGATATTTATAGTTATGGGATGCTACTCTTGGAAATGGTCAGCGGAAGGAAAAATGTTGATGCAAACAAAGAAACTTTTCAAGTTCTATATCCAGAATGGATTCATAATTTGATCAAAGGAGAAAACATGATTATTTCTACAGAAGATGAAGTTGACATTAGAATTGCTAAAAAACTGGCAATTGTAGGACTTTGGTGCATTCAGTGGCATTCAATAAATCGTCCATCCATGAAAACAGTGGTACAGATGTTGGAAGGAGAAGTAGATAAACTAAAGGTGCCTCCAACTCTAGTTGATTTGACCGCTTCTACCAATACAAGTACTATTATTCCTGCGAGGCATTTGAATTTAGAATCATGA 1653 0.3962 MFSHRRFWLLVILQVWVRLLKQGNGKNHQQVPHNETLPFRLKEDGDMVEFPSIHALQGVSLSVSDINNESHILEVKDPEQCLPMLFLQNHLYNSSSIYPLEYDTDNMTENITFFDCSSATSEYTPKSCPILALGSHDSVLSGDLLSCAMRIRLDSPIPAEHLQGNRLRLKWIQQKVDKHKTSKMPRIVLPGTGSIVLVLLLVVCVYTCRYFKKKGDDQARLEKFLKNYEALKPTRFSFADIKRITHSFKDKLGEGSHGTVFKGKLSAKIQVAVKVLNNSDNDGKDFINEMGTMGQIHHINVVRLLGFCADGFHRALVYDFFPNGSLQKFIFSQDNRENFLGWSKLQQIALGIAKGIEYLHQGCDYRILHFDINPHNVLLDDKFTPKISDFGLAKLCSKNQSMVSMTVARGTLGYIAPEVFFPNFGHVSYKSDIYSYGMLLLEMVSGRKNVDANKETFQVLYPEWIHNLIKGENMIISTEDEVDIRIAKKLAIVGLWCIQWHSINRPSMKTVVQMLEGEVDKLKVPPTLVDLTASTNTSTIIPARHLNLES 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1584g00008 550 Gene3D Transferase(Phosphotransferase) domain 1 321 524 - -
Pral1584g00008 550 Pfam Protein kinase domain 249 513 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1584g00008 550 FunFam PR5-like receptor kinase 321 526 - -
Pral1584g00008 550 PANTHER RUST RESISTANCE KINASE LR10-RELATED 219 528 IPR045874 GO:0004672
Pral1584g00008 550 FunFam serine/threonine-protein kinase PBS1-like 214 320 - -
Pral1584g00008 550 ProSitePatterns Protein kinases ATP-binding region signature. 252 274 IPR017441 GO:0005524
Pral1584g00008 550 Gene3D Phosphorylase Kinase; domain 1 220 320 - -
Pral1584g00008 550 ProSiteProfiles Protein kinase domain profile. 246 528 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1584g00008 550 SUPERFAMILY Protein kinase-like (PK-like) 229 516 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1584g00008 Pral-Chr1584 70079 72015 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1584g00008 174 526 Receptor kinase-like Gene Family AT1G66910 44.892 1.19e-101 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral1584g00008 Pkinase 1.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1584g00008 - - tpra:123893290 578.556