Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1584g00006 ATGTTGAGCGCCGATCTTCCTGAAGAAATTGTGGAGGAGATATCGATGAGGCTTCCTGTGAAATCCCTACTTCGATGCAAATCCGTGGCGAAATCCTGGTACGCACAAATCACTAATCCATCTTTTATAAGTAGACAATTTGAATGGTCTGATTCAATCACCAAAAACCGCCGCCGCCAGCTGATATTTCGATTGCACAATGCCTCTCTGAAGCCTTGCATTTCTCTAATTTCCGACCAGGAACCCATCGATATAGAAGTGCCGTTTCCTGAGAAGGATGTAGAATACATATTCGTTTATGGTCAATGTAATGGGATTTTCTGTCTCTATGGGGTCTATGGAGGAGATAAAGCTGGTGAGGCCAGCTTGATTCTGTGGAATCCTGGAACAAGAGGTGAAGGAAGAGAACAACCTCCAGTTGAGGTGTATAATCTCAGTACTGGTTCTTGGAGAACCATAGATTCTGTTGTCCCTGCTTTTCGATTGTGTTATCCAAAATGCAGGGCTTATCTGAATGGGTTTTATCACTGGCTAACTGAAGATAATAATGATAAGGCCATTTTGTTCTTTGATTTTGGCAACGAGGTGTTTGGGAAGATTCAGTTGCCTCCTGAAATTGATCAATCTTATGAATCAAATGTTGCTGTGGTTGATGAGAAACTTGCTTGTGCTGCTACATATAAGATGACCAATTGTAGATATGAAATCTGGGTGATGAATGAGTATGGTGTTGAGAGTAGCTGGAGTAAGAAATTTGTTATTGGACCAAACCCAGAATTTGGATCATTTTTAGGATTTTGGGGAGATGATGAGATTCTTGTTGAAAATGAAGGTCATTTGGTTTCATATAATATTAAGAATCAGAAGATACAGAGGCTCGAAATCCTTGGAGTTCCAAAACTGTTCAAAGTGTTTGATTATGTGGAAAGCTTGGTTCCTTTGAAGTCTTAA 951 0.4017 MLSADLPEEIVEEISMRLPVKSLLRCKSVAKSWYAQITNPSFISRQFEWSDSITKNRRRQLIFRLHNASLKPCISLISDQEPIDIEVPFPEKDVEYIFVYGQCNGIFCLYGVYGGDKAGEASLILWNPGTRGEGREQPPVEVYNLSTGSWRTIDSVVPAFRLCYPKCRAYLNGFYHWLTEDNNDKAILFFDFGNEVFGKIQLPPEIDQSYESNVAVVDEKLACAATYKMTNCRYEIWVMNEYGVESSWSKKFVIGPNPEFGSFLGFWGDDEILVENEGHLVSYNIKNQKIQRLEILGVPKLFKVFDYVESLVPLKS 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1584g00006 316 Gene3D - 4 42 - -
Pral1584g00006 316 Pfam F-box domain 5 42 IPR001810 GO:0005515
Pral1584g00006 316 Pfam F-box associated 170 299 IPR006527 -
Pral1584g00006 316 SUPERFAMILY F-box domain 5 67 IPR036047 GO:0005515
Pral1584g00006 316 PANTHER OS09G0372900 PROTEIN-RELATED 6 270 - -
Pral1584g00006 316 CDD F-box_AtFBW1-like 4 42 - -
Pral1584g00006 316 NCBIfam F-box protein interaction domain 136 274 IPR017451 -
Pral1584g00006 316 ProSiteProfiles F-box domain profile. 1 46 IPR001810 GO:0005515
Pral1584g00006 316 SMART fbox_2 6 46 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1584g00006 Pral-Chr1584 59601 60669 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1584g00006 141 264 Carbohydrate Esterase AT1G25141 27.407 3.71e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1584g00006 - - pcin:129320976 497.664