Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1581g00006 ATGGTTGAGAGCCAACCATGGTGGACCAATCTGATACTGATGCCTAAGGGTTTCAGATTCCGTCCGAGAGATGAAGAACTCGTTGGTCATTACCTCTACCACAAACTGATGGCTGATGATCCTTCCATCCACAACATCATCCCTGAGATTGAGATTTGCAAGTACGAACCATGGGACTTACCAGCATTATCGCTGATCAAGTCGGCGGACTCGGAATGGTTTTTCATCAGTCCTCGCGATTACAAGTACTCAAACCGTACTCTGTGTAATAGGACAACATCACGTGGTTACTGGAAACCCACCGGTCAAGAGAGGAAAATCAAGGATCGAGTCACCAACAATGTCATTGGGACCAAAAGGACACTAGTTTTCTACCGAGGACGTGCTCCCGGCATTAAAGATAATTGGGTTATTCGTGAATGTCATGATGCCCTCTTCCCTCCCAATCAGGTAAGCTTCGAGCTAGGGGTTTAG 474 0.4684 MVESQPWWTNLILMPKGFRFRPRDEELVGHYLYHKLMADDPSIHNIIPEIEICKYEPWDLPALSLIKSADSEWFFISPRDYKYSNRTLCNRTTSRGYWKPTGQERKIKDRVTNNVIGTKRTLVFYRGRAPGIKDNWVIRECHDALFPPNQVSFELGV 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1581g00006 157 Gene3D NAC domain 23 149 IPR036093 GO:0003677|GO:0006355
Pral1581g00006 157 Pfam No apical meristem (NAM) protein 15 140 IPR003441 GO:0003677|GO:0006355
Pral1581g00006 157 ProSiteProfiles NAC domain profile. 14 157 IPR003441 GO:0003677|GO:0006355
Pral1581g00006 157 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 14 140 - -
Pral1581g00006 157 SUPERFAMILY NAC domain 6 143 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1581g00006 Pral-Chr1581 62594 63246 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1581g00006 14 140 NAC Transcription Factor Family AT4G35580 57.031 1.13e-43 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral1581g00006 NAM 5.2e-31 No_clan