Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1581g00005 ATGGCTGAGACAACCACGACGGATCCAGCTCCGATGCAGAGCCGTGTGCCTCCGGGATTCAAATTCTGTCCTACCGAGGAACAGCTCGTCGCTTACTACCTCCGCCACAAATTGATGGCCCTTGATCCTTCCGTTTACACCACCTTACCTGACATTGACGTCTGCAAGTTCGAGCCCTGGGATTTATTATCTCTTGCTACTTCAGCGGCTTCGGCGACCAAGTTTGACGACTCGGAGTGCTTTTTCTTCAGTCCTCCTGATTATAAGTACGCTAAGAGTACTCGGTGGAACAGGACAACATCGTGTGGCTCCTGGAAGTTCACCGGCCGGGATCGGAATATCAGAGAGCAAGGCACCAACAATGTCATTGGGATTAAAAGGATTCTAGTTTTCTACGAAGGTCGTTCTCCTCGTGCACGTAAAACCAATTGGGTTATTCATGAATATCATGATGCCACACTTCCTCTGGAACAGAGGAACTTTATTCTATGCAAGTTAAGGAAGAAATATGAGAAGAAAATAAAAGAAAAAACTATTGACTTTGATCAAAGATTATTTGAGCTTGAAAGGGAGCTCAATAATGACACAGACTTCGAATATGAAAATCAAGCAAATTTCAATATGATTTCAAAGGAATATTGTTCATTAAATATGAGCTCAACCACTCAAACCTCTCCCCAAGAAGTTATAGACAACACAGGCACTCAAGCTCAATTCCTTTCAAATGAAGATACGGACTCAATGATTCAAGAACTTCTCCAGTCAAATGAAGCTATACCACAAAAACTAAATTCAAGCAGTGAAACACCGCTTGAGTTTGATTACGAAGAGTTGTACTCCAGCTTGGTCGTGTAG 855 0.4292 MAETTTTDPAPMQSRVPPGFKFCPTEEQLVAYYLRHKLMALDPSVYTTLPDIDVCKFEPWDLLSLATSAASATKFDDSECFFFSPPDYKYAKSTRWNRTTSCGSWKFTGRDRNIREQGTNNVIGIKRILVFYEGRSPRARKTNWVIHEYHDATLPLEQRNFILCKLRKKYEKKIKEKTIDFDQRLFELERELNNDTDFEYENQANFNMISKEYCSLNMSSTTQTSPQEVIDNTGTQAQFLSNEDTDSMIQELLQSNEAIPQKLNSSSETPLEFDYEELYSSLVV 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1581g00005 284 SUPERFAMILY NAC domain 7 169 IPR036093 GO:0003677|GO:0006355
Pral1581g00005 284 ProSiteProfiles NAC domain profile. 16 169 IPR003441 GO:0003677|GO:0006355
Pral1581g00005 284 Gene3D NAC domain 25 175 IPR036093 GO:0003677|GO:0006355
Pral1581g00005 284 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 235 - -
Pral1581g00005 284 Pfam No apical meristem (NAM) protein 17 150 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1581g00005 Pral-Chr1581 54000 55710 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1581g00005 16 177 NAC Transcription Factor Family AT3G49530 44.910 6.34e-42 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral1581g00005 NAM 7.8e-28 No_clan