Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1581g00004 ATGGCGGACCCAACTCTTATGCAGCAAGATATGCCGGTGGGGTACAAATTCTGCCCGACCGATGAAGAGCTCGTCGGTCATTACCTCCGGCACAAATTGATGGCTGATGATCCCTCCATCCACGATACCATCCCTGAGATTGACGTTTGCAATTTCGAACCCGGGGAATTACCAGCTGTTGTTTCATCGTTTTCGCTGAACAAGTCAGGCGACCCAGAATGGTATTTCTTCAGTCCTCGCAGTTACAAGTACCCAAATAGCAATCGGTGTAATAGGGCAACATCGAGTGGCTACTGGAAAGTAACCGGTCAAGACAGAAGAATCAGGGATCTTGCCACCAACAACGTTACTGGGACCAAGAAGAGTCTAGTTTTTTACCAAGGACGCACTAAAAGTAATTGGGTCATTCATGAATATCAATATTGTGATGACCTTTTTCCTCCAAACCAGGGAACTTATGTTCTATGTAAGTTAACGAGGAAATCCGAGAAGAAAACAAAAGAAAAGACGGATAAGACAAGGAAGCCAAATGACACTATGGCTTCCGAGTATGGAAATCAAGCAAATGATATGATTCCAGGAGTACAAATTCCGGAGTCAGGTGACTTTGGAGGCTCACCGCACGAAGTGGGGTCAACCAGTGAGATGCTACTTGATGAACCAGAAGACGCATTTGATGTGGATTCGTTTTTGCTGTGGTCTCTGAGTGAGGATAAGTAA 720 0.4528 MADPTLMQQDMPVGYKFCPTDEELVGHYLRHKLMADDPSIHDTIPEIDVCNFEPGELPAVVSSFSLNKSGDPEWYFFSPRSYKYPNSNRCNRATSSGYWKVTGQDRRIRDLATNNVTGTKKSLVFYQGRTKSNWVIHEYQYCDDLFPPNQGTYVLCKLTRKSEKKTKEKTDKTRKPNDTMASEYGNQANDMIPGVQIPESGDFGGSPHEVGSTSEMLLDEPEDAFDVDSFLLWSLSEDK 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1581g00004 239 SUPERFAMILY NAC domain 5 161 IPR036093 GO:0003677|GO:0006355
Pral1581g00004 239 ProSiteProfiles NAC domain profile. 11 161 IPR003441 GO:0003677|GO:0006355
Pral1581g00004 239 MobiDBLite consensus disorder prediction 165 213 - -
Pral1581g00004 239 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 11 178 - -
Pral1581g00004 239 Pfam No apical meristem (NAM) protein 12 140 IPR003441 GO:0003677|GO:0006355
Pral1581g00004 239 Gene3D NAC domain 20 167 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1581g00004 Pral-Chr1581 22517 23916 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1581g00004 9 161 NAC Transcription Factor Family AT4G35580 50.000 6.52e-45 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral1581g00004 NAM 2.2e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1581g00004 - - pcin:129287716 235.343