Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1581g00002 ATGGCGGACCCAGCTCTTATGCAGCAAGATATGCCGTTGGGGTACAGATTCTGCCCCACCGATGAAGAGCTCGTCGGTCATTACCTCCGGCACAAATTGATGGCTGATGATCCCTCCATCCACGATACCATCCCTGAGATTGACGTTTGCAATTTCGAACCCGGGGAATTACCAGCTGTTGTTTCATCGTTTTCACTGAACAAGTCGGGCGAACCAGAATGGTATTTCTTCAGTCCTCGCGATTACAAGTACCCTAATAGCAATCGGTGTAATAGGGCAACATCGAGTGGCTACTGGAAAGTGACCGGTCAAGACAGAAAAATCAGGGATCTTGCCACCAACAACGTTATTGGGACCAAGAAGAGTCTGGTTTTCTACCAAGGACGCACCAAAAGTAATTGGATCATTCATGAATATGACCTTTTTCCTCCAAACCAGGGAACTTATGTTGTATGCAAGTTAACGAGGAAATCCGAGAAGAAACCAAAAGAAAAAACGGATGAGATGGTTCATGGTACAAGGAAGGCAAATGCCAGTATCGCTGCCGGCTATGAAAATCAAGCAAATGATATGATTCCAGGAGTACAAATTCCGGACTCAGGTGACTTTGGAGGCTCACAGTACGAGGTGGGGTCAAGCAATGAGATGCTACGTGATGAATCAGAAGACGGATTTGATGTCGATTCGTTTTTGCTGTCGTCTCCGCTTGAGGATAAGCAAGACTAG 726 0.4628 MADPALMQQDMPLGYRFCPTDEELVGHYLRHKLMADDPSIHDTIPEIDVCNFEPGELPAVVSSFSLNKSGEPEWYFFSPRDYKYPNSNRCNRATSSGYWKVTGQDRKIRDLATNNVIGTKKSLVFYQGRTKSNWIIHEYDLFPPNQGTYVVCKLTRKSEKKPKEKTDEMVHGTRKANASIAAGYENQANDMIPGVQIPDSGDFGGSQYEVGSSNEMLRDESEDGFDVDSFLLSSPLEDKQD 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1581g00002 241 ProSiteProfiles NAC domain profile. 11 157 IPR003441 GO:0003677|GO:0006355
Pral1581g00002 241 SUPERFAMILY NAC domain 4 157 IPR036093 GO:0003677|GO:0006355
Pral1581g00002 241 Pfam No apical meristem (NAM) protein 12 141 IPR003441 GO:0003677|GO:0006355
Pral1581g00002 241 MobiDBLite consensus disorder prediction 185 225 - -
Pral1581g00002 241 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 8 172 - -
Pral1581g00002 241 Gene3D NAC domain 20 163 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1581g00002 Pral-Chr1581 10125 11721 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1581g00002 5 182 NAC Transcription Factor Family AT4G35580 46.561 1.42e-48 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral1581g00002 NAM 2.7e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1581g00002 - - pcin:129287716 250.366