Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1581g00001 ATGGCAAATTCAGCTCCGACGAAGAGACGTGTGCCGGTGGGATACCGATTCCGTCCGACCGAGAAAGAGCTCGTTGCTCACTACCTCAGCCGCAAATTGAAGGCCCGTGATTCTTCCGTTCACAACACTATCCCGGAGATTGATGCCTGCAAGCTTGAACCCGGGGATATACTAGCGCTTTTGGCGAATAAGTTTGACGATTCGGAGTGCTTTTTCTTCAGTCCCTACAATTATAAGTACTCTAACAGTACCCGGAGGGACAGGAGAACATTGCGTGGCTTCTGGAAAGTTACTGGTAGAGGCAGTAAAATCATAGATCAAGACACTAACAATGTCATTGGGACCAAGAAGAATCTAGTTTTCTATAAAAAGCACGAACCTCGTGCTCAGAAAACTAATTGGGTAATTCATGAATATCATGACGCTACCCTACCAGCACATGAGAGGACTCATGCTTTATGCTGGTTAAAAAAGAACAACGAGAAGAAAACAAAAGAAAAAACTTATCACTTAGTTGATGATAAGGGGAAGTCAAGTAATATGATACTTGAAGATAAAAATCAGGAATGTTGTTTCTCTGATTTGAGTTCAAATACTCAAGGATCTTCCCAGTCAAATGAAGCTATAAGTTTGTTCACACAAACACCTTCCCAATCAAATGAAGCTATGGACTCAATAATTCAGATGATTTCCCAATCAAATGAAGCAGAAGATCTATCGATTCAAACATTTTTTCACTCAAATGAAGTTATGAACCTAGAGGTTCAAATACCTTCCCAATCAATTGAATCTGAATCTATAGATTCAATGATTCAAACACTCTTTCAATCGGATGAAAATATAAACTTAATGGTTTATGCACCATTTATGCCAAATTCTAGCATTGAACTACCACTTGATGCATGA 906 0.394 MANSAPTKRRVPVGYRFRPTEKELVAHYLSRKLKARDSSVHNTIPEIDACKLEPGDILALLANKFDDSECFFFSPYNYKYSNSTRRDRRTLRGFWKVTGRGSKIIDQDTNNVIGTKKNLVFYKKHEPRAQKTNWVIHEYHDATLPAHERTHALCWLKKNNEKKTKEKTYHLVDDKGKSSNMILEDKNQECCFSDLSSNTQGSSQSNEAISLFTQTPSQSNEAMDSIIQMISQSNEAEDLSIQTFFHSNEVMNLEVQIPSQSIESESIDSMIQTLFQSDENINLMVYAPFMPNSSIELPLDA 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1581g00001 301 Gene3D NAC domain 20 180 IPR036093 GO:0003677|GO:0006355
Pral1581g00001 301 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 11 196 - -
Pral1581g00001 301 Pfam No apical meristem (NAM) protein 12 140 IPR003441 GO:0003677|GO:0006355
Pral1581g00001 301 ProSiteProfiles NAC domain profile. 11 159 IPR003441 GO:0003677|GO:0006355
Pral1581g00001 301 SUPERFAMILY NAC domain 8 155 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1581g00001 Pral-Chr1581 452 27444 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1581g00001 11 156 NAC Transcription Factor Family AT4G35580 46.053 5.70e-38 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral1581g00001 NAM 7.2e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1581g00001 - - pcin:129322017 247.284