Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1580g00007 ATGCAGCGAGATCAGCTCAAGAAGGATGTTAAAGAATTGGACTTTTTCACTGAGTATGGGGATGCAAATAGATATAAGATTCTTGAAGCTATAGGAAAAGGAAGCTATGGAGTAGTTTGTGCCGCAATTGACAAGCACACTGGGGAAAAAGTTGCAATAAAAAAGATTCATGATATTTTTGAGCATATATCTGATGCCATTAGAATTCTCCGCGAGGTCAAGCTGCTACGGCTATTAAGACACCCTGATATTGTCGAGATTAAGCGCATCATGTTGCCACCTTCAAAGAGGGAGTTTAAAGATATTTATGTCGTCTTTGAATTGATGGAGTCTGATCTCCATCAAGTCATCAAAGCTAATGATGACTTGACACGTGAGCACCATCAGTTTTTCCTTTACCAGATGCTACGTGCATTGAAGTACATGCATACAGCAAATGTGTATCACAGAGACCTTAAACCCAAGAATATATTGGCAAATGCAAATTGCAAACTCAAAGTTTGTGATTTTGGACTGGCCAGAGTTGCATTCAATGATGCCCCAACAACAATATTTTGGACAGATTATGTGGCTACAAGATGGTACAGAGCTCCAGAGCTGTGTGGATCATTCTTTTCTAAGTATACACCAGCAATTGATATATGGAGCATTGGATGCATCTTTGCTGAGGTGCTTACAGGAAAGCCGTTGTTCCCTGGTAAAAGCGTTGTGCATCAATTAGATTTGATTACTGATCTTCTTGGGACACCAACACTGGAGACTATTTCTGGAGTTCGTAATGAAAAGGCAAGGAAGTACTTGACAGAAATGGGGAAAAAATCTCCTGTGCCATTTGAACAGAAATTTCCAAATGCTGATCCATTGGCACTTCGCCTATTGCAAAGGCTTTTGGCATTTGATCCTAAGGATCGTCCAACTGCTGAAGAGGCACTAGCTGATCCATACTTTAAGGGCTTGGGTAAGGTCGAGAGAGAACCATCTTGTCAGCCAATTTCAAAGCTGGAATTTGAGTTTGAGAGGCGAAGGGTGACTAAAGAAGATGTTAGGGAACTAATATATAGGGAGATACTTGAATATCACCCTCAGTTGCTTAAAGATTACATGAATGGAACTGAAAGCACAAATTTCCTCTGTCCTAGTGCAATTGGTCAATTCAGAAAGCAGTTTGCTTATTTTGAGGAAAATGGTGGTAAAAGTGGCCCAGTGATTCCTCCAGAAAGGAAGCATGCCTCTCTTCCAAGGTCCACTGTTCATTCTAGCCCAATTCCTCCTTATACACATGGCGCTGCATATGGGAACAAGCAAATACCAGTGGAGGTGTCTAAGAATTTGAGAGCAACAGAATCAAGTTCTGAAAGTCATTTAAGGGGTTCACGACCTCCTCCAAGGGTGCCAACAGCTAAACCGGGCAAAGTTGTAGGGCCAGTTCTACCCTACGAGAATGGGAGAAATGTCAAAAGCAACTATGATCCAAGAATCTTGAGCAAAAATGCTCTTCCTCCTTCGGTATCTCCCCACTGCCCCTTTAGGGCTCAACCCACAAACCCAGCAAGGATTGTGCCAGAGACATGCAGGGATCTGTCACAGGGAAAACAGCCATCCCAGCAGCAGGCTAACTCACTAGCCAGACAAACTATTGACCTCAACACTAACCCTTACTTCCAACAATCCAAGGTAGATAACATGGATGATGCTGCCACCACAATGGATGCTAAGTTGCTGCAGGCACAGTCTCAGTTTGGTGCTGTTGGTGCTGCTGCAGTGGCTATTGCAGCTCATAGACATTCTTCTGGGGCTTTTTAG 1803 0.4304 MQRDQLKKDVKELDFFTEYGDANRYKILEAIGKGSYGVVCAAIDKHTGEKVAIKKIHDIFEHISDAIRILREVKLLRLLRHPDIVEIKRIMLPPSKREFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQMLRALKYMHTANVYHRDLKPKNILANANCKLKVCDFGLARVAFNDAPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQLDLITDLLGTPTLETISGVRNEKARKYLTEMGKKSPVPFEQKFPNADPLALRLLQRLLAFDPKDRPTAEEALADPYFKGLGKVEREPSCQPISKLEFEFERRRVTKEDVRELIYREILEYHPQLLKDYMNGTESTNFLCPSAIGQFRKQFAYFEENGGKSGPVIPPERKHASLPRSTVHSSPIPPYTHGAAYGNKQIPVEVSKNLRATESSSESHLRGSRPPPRVPTAKPGKVVGPVLPYENGRNVKSNYDPRILSKNALPPSVSPHCPFRAQPTNPARIVPETCRDLSQGKQPSQQQANSLARQTIDLNTNPYFQQSKVDNMDDAATTMDAKLLQAQSQFGAVGAAAVAIAAHRHSSGAF 600
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1580g00007 600 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1580g00007 600 SUPERFAMILY Protein kinase-like (PK-like) 21 319 IPR011009 -
Pral1580g00007 600 MobiDBLite consensus disorder prediction 396 430 - -
Pral1580g00007 600 FunFam Mitogen-activated protein kinase 15 119 - -
Pral1580g00007 600 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 24 365 - -
Pral1580g00007 600 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Pral1580g00007 600 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Pral1580g00007 600 MobiDBLite consensus disorder prediction 445 479 - -
Pral1580g00007 600 Gene3D Phosphorylase Kinase; domain 1 40 362 - -
Pral1580g00007 600 CDD STKc_TDY_MAPK 24 361 - -
Pral1580g00007 600 FunFam Mitogen-activated protein kinase 111 339 - -
Pral1580g00007 600 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Pral1580g00007 600 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1580g00007 600 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1580g00007 Pral-Chr1580 37358 42335 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1580g00007 1 595 MAP Kinase Gene Family AT1G53510 70.636 0.0 814
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Pral1580g00007 Pkinase 7.8e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1580g00007 - - gmx:100800878 948.347