Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1580g00001 ATGGGTCCTGATACAATAATGGGAAGTGGAGACTACCCTCTGCTGAAGGATTTGAGATTGGAAATTGAAGGAAAGGAGGGAACTTTCTCGGTCTGTTTCTGGGTTTATCTTATGAGCTCCACCACATTCCCTGCTACGATTCTCCAACAGGTGCGCTCTGATATCTCCAAAAGTGCCCCTTTTCTTGTTATAAATGACAATAAGAGAATCAACCTTTTACCTGTTATTCTCTTACACGAAGAAGCTCCTAATGTTGGCGATGTCAATTCATGGGCAGAAGTTCCGCATGCAACTGTAGATTTTGAGTTCCCTTTAGAAAAATGGATCCATGTTGGATGTGAGATTACCCCAGACCATATTCAGCTTCAGATTAATGGAGAGATTGTTGGAGCAAAATCTCTGTCTTCCTTATTAAATAAGGAATCCAATTCAATTGGTTTGACTAAAATTGCTTTGGCTTATGTCGGTGGTGATGGCAATATTGTTCAGGGTTATGTGCACAACTTGGAAGTCTTGCCCTCTGCTTCCTCTATTAAGGATCAACATTTAAAGGACCCTCCTCTGAAGTTATCTATTGATGAATTGTCTGCCTCTGAGATTGAAGAGGAAAGTGATGGAGTCTGGAGCATTGTTGGTGGCAAGGCATCGTGTCGTAGGAACTTCTCTTTGGATGTTGTTCTGTCAGATGCTTTTGGCCAGCCTGTAGACAAGGATAGTGAGGTGTTTGCTTCACTTTTGTATGCTGATACTGGAGCACCTGTGGAGAACACAACTGATGCTGAAGCACCTCTTTTGCTTAGCTCTGATGGGACCGAATATTCTGCTCATGAAAGACCAAGTAAACTCTTGCAGGGACGTGCCTCATTTAAGCTCAAGATATCTCAGCTTTCATCCAAGTGTGATAATAGGCTGTTCCTCATCCGGTTTTGTCTTCCGAAGTTGGGAAGTTATCCTTTTCTTGAGACATCCTCTCGTCCAATTCGATGTATTTCCAGAAGTCGCAACACAAGATTGTCGACTTTGGTGTGGAAAAGATCAACTCCTCCTGATGCTTCATTGGAACTTCAAAATGCTGCTGCTCATGAAGCAAAAGCCAGTAGTCCATCGATGAAGCGGTTTAGACTTGGGCATGACAAAATATCTGTATCAGTGAAGGCTGACGGTGCCTCAGAGCAGCCTGATGAGGAATGCAATTCTCATGCCAGGACCATAAATCGGATTGAGAATGGGTTTGCAACAAGCTTGGAAGGTAGACCTGAGAACTTTGATGAAGCAGATAACTCTCCATCTGATTCAGGGAGCATAGGGGAGGAAAATTCACAGTCCAAGATCGCAAGAAATCCAATCTCTGACATGACCATATTCAAATACTGCCTGGCAGGCTTAACTGAGAGGTCTCTTGTGCTCAAGGAAATAGCTTCCTCTGCCTCTGACAAAGAAATTTTGGAATTTGCATCCCAGGTGTCACACTATTCAGGATGTTCACATTATGGAACCCAAATATCATTTTCCAAGGGATTAATAGAGGAAGGAACTCTGGTATGGAAGACATTGTCCCAAAACAACTACAATATACGGTGGGACAGTGCAGTTTATGAGATTGAAGAGCACTTCATGAAGATTGCTCGCTGCAGTTCAAGAGCTCTCACACTCCAGGTGACTACCTTTTTAAATATTCTGTAA 1683 0.429 MGPDTIMGSGDYPLLKDLRLEIEGKEGTFSVCFWVYLMSSTTFPATILQQVRSDISKSAPFLVINDNKRINLLPVILLHEEAPNVGDVNSWAEVPHATVDFEFPLEKWIHVGCEITPDHIQLQINGEIVGAKSLSSLLNKESNSIGLTKIALAYVGGDGNIVQGYVHNLEVLPSASSIKDQHLKDPPLKLSIDELSASEIEEESDGVWSIVGGKASCRRNFSLDVVLSDAFGQPVDKDSEVFASLLYADTGAPVENTTDAEAPLLLSSDGTEYSAHERPSKLLQGRASFKLKISQLSSKCDNRLFLIRFCLPKLGSYPFLETSSRPIRCISRSRNTRLSTLVWKRSTPPDASLELQNAAAHEAKASSPSMKRFRLGHDKISVSVKADGASEQPDEECNSHARTINRIENGFATSLEGRPENFDEADNSPSDSGSIGEENSQSKIARNPISDMTIFKYCLAGLTERSLVLKEIASSASDKEILEFASQVSHYSGCSHYGTQISFSKGLIEEGTLVWKTLSQNNYNIRWDSAVYEIEEHFMKIARCSSRALTLQVTTFLNIL 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1580g00001 560 PANTHER SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTION 30 557 IPR001217 GO:0003700|GO:0006355|GO:0007165
Pral1580g00001 560 SUPERFAMILY Concanavalin A-like lectins/glucanases 8 171 IPR013320 -
Pral1580g00001 560 MobiDBLite consensus disorder prediction 415 443 - -
Pral1580g00001 560 MobiDBLite consensus disorder prediction 426 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1580g00001 Pral-Chr1580 360 6778 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF STAT Pral1580g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1580g00001 - - gmx:100803169 783.097