Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1576g00182 ATGGATTTTAGTTTTATGTCATACTTCGATCGTTTCAGAAGTTCTGCCAATTCATTCTTATCGCAATACGAGCCAATTGTTCTGCTCCTCTCTCCCCTGCTTCCTGTCCTTCTCGCCCACACAATTCGGTCGTTTTTTCATGTCGTGCGCGATAAAGGACTTAAACCCACTCTTATAGGGCTACTCATCAACTCTATCAAATTGATCCCTGGTGTGAAGAGTTACATCAATGCCGAAAAACAGAAGGTTGTGGATAAGTTGCAGTCTGACAGCAAATCTAAAAGGGAAGGTTGGAGAACAGAGCTACCAAGGGCAGGACTAGGGATGGAAGTTCTTGAAAAAATGAGAGATGAGAAAAGAAATGATGTCATTTGGCAAGGAAAATGCTCTGGTACCGTCTACATTGGAGGAAGTGAATTTGATGCACACTTTTCTCTGATAAATGAGGCATGCTCAATGTTTGCACATACCAATCCTTTGCATTTGGATGTATTTCAAAGTGTTGTGCGCTTTGAGGCAGAAGTGGTTGCAATGACAGCTGCACTTCTTGGAGGTAGAGAAAAAAGTTCGGGTGGGCAAATTTGTGGAAATATGACATCAGGAGGGACGGAAAGTATATTATTAGCTGTCAAGTCATCACGTGACTATATGAAGTCTAAAAAAGGAATTACAAGACCTGAAATGATAATACCTGAGTCTGCACACTCAGCATATGACAAGGCTGCTCAATATTTTAACATCAAACTCTGGCGCATTCCTGTTGACAAAAGATTTCAAGCGGATCTGAAAGCAATTCAACGTCATATTAACAAAAATACCATCTTGATTGTTGGCTCTGCCCCTGGATTTCCCCATGGAATAATTGACCCCATTGAAGAACTTGGTGACCTGGCATCAGGCTTTGGAATTTGCTTTCATGTTGACCTTTGTCTTGGTGGCTTTGTATTACCTTTTGCTCGTAAGCTTGGGTACTCGATTCCACCTTTTGACTTCTCCGTTAAAGGAGTTTCTTCAATATCAGTGGACGTGCACAAATATGGTTTAGCTCCCAAAGGAACAAGTATAGTACTGTACAGGAACCATGACATCAGAAAGCATCAATTTGTTGCTGTTACTGAATGGTCTGGTGGGTTGTATGTTTCTCCAACCATGGCTGGAAGCAGGCCTGGAGGCCTTATTGCTGGGGCTTGGGCAGCAATGATGTCCATTGGGGTAGAAGGTTACCTGGAGAATACAAAAGCAATTATGGATGTTTCAAGAAGAATACAGGAGGGCATTGGAGAGATTCCAGAATTATTCATCGTTGGAAGACCTGACATGACAATTGTGGCCTTTGGATCTGATGTTCTGGACATATTTGAAGTCAATGATATCATGTCATCCAGAGGGTGGCATTTGAATGCATTGCAGCGACCGAACAGCATTCATATCTGTGTGACGCTGCAGCATTTGGCGGTTGTTGAAGACTTCCTCAGGGATTTAAAGGAATCTGTTATAACCGTAAAAGAAAATCCTGGTCCAGTAAGTGGAGGGTTAGCACCTATATATGGTGCGGCAGGCAAGATGCCTGATAGAGGTATGGTAGAGGAATTGCTGGTGGATTTCATGGACGGTACCTGCTAG 1623 0.4276 MDFSFMSYFDRFRSSANSFLSQYEPIVLLLSPLLPVLLAHTIRSFFHVVRDKGLKPTLIGLLINSIKLIPGVKSYINAEKQKVVDKLQSDSKSKREGWRTELPRAGLGMEVLEKMRDEKRNDVIWQGKCSGTVYIGGSEFDAHFSLINEACSMFAHTNPLHLDVFQSVVRFEAEVVAMTAALLGGREKSSGGQICGNMTSGGTESILLAVKSSRDYMKSKKGITRPEMIIPESAHSAYDKAAQYFNIKLWRIPVDKRFQADLKAIQRHINKNTILIVGSAPGFPHGIIDPIEELGDLASGFGICFHVDLCLGGFVLPFARKLGYSIPPFDFSVKGVSSISVDVHKYGLAPKGTSIVLYRNHDIRKHQFVAVTEWSGGLYVSPTMAGSRPGGLIAGAWAAMMSIGVEGYLENTKAIMDVSRRIQEGIGEIPELFIVGRPDMTIVAFGSDVLDIFEVNDIMSSRGWHLNALQRPNSIHICVTLQHLAVVEDFLRDLKESVITVKENPGPVSGGLAPIYGAAGKMPDRGMVEELLVDFMDGTC 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1576g00182 540 PANTHER - 40 540 - -
Pral1576g00182 540 FunFam sphingosine-1-phosphate lyase 1 140 404 - -
Pral1576g00182 540 Gene3D Aspartate Aminotransferase, domain 1 109 503 IPR015422 GO:0003824
Pral1576g00182 540 Gene3D - 101 537 - -
Pral1576g00182 540 Gene3D - 137 404 IPR015421 GO:0003824
Pral1576g00182 540 Pfam Pyridoxal-dependent decarboxylase conserved domain 151 445 IPR002129 GO:0016830|GO:0019752|GO:0030170
Pral1576g00182 540 SUPERFAMILY PLP-dependent transferases 76 501 IPR015424 -
Pral1576g00182 540 FunFam Sphingosine-1-phosphate lyase 1 501 539 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1576g00182 156 500 Calmodulin-binding Proteins AT3G17760 26.301 8.34e-26 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1576g00182 K01634 - gmx:100794395 930.628