Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1576g00181 ATGGCGGCTGCTTTTTCAACGTCAAATGTCCGGTCTTTGCCGAGTCCACGAAGCGGTACTCAGATCAGAGCTATGTATCATAAGAATAGTGCGAGTTCATTTAAGCTCACGGGATTTCCTACGCGATCGCATATATGCTCCTCACTGAGCGCCTTTGCCGGTTCGTTGCGTTTGGTGACTCACACCTCTTCTTGGAATGCTTCTTCTCAAGAAAGAACGCGTTTTACCAGCTTGGTTCGGGCCAGTTCTGAGGAAGTACCTTTACAATCAAAAATTACTCACAAGGTGTATTTTGACATAAGTATTGGAAATCCCGTGGGAAAGCTTGCTGGAAGGGTTGTGATTGGACTCTATGGTGATGATGTGCCCCAAACAGTAGAGAACTTTCGTGCACTTTGCACAGGAGAGAAAGGCTTTGGGTACAAAGATTCTACATTTCATCGTGTGATAAAGGATTTCATGATTCAGGGAGGGGACTTTGACAAGGGGAATGGAACTGGAGGTAAAAGTATTTATGGCCGCACTTTCAAAGATGAGAATTTCAAGTTGTCTCATGTAGGACCAGGAGTTGTTAGCATGGCAAATGCAGGGCCCAACACCAATGGGAGTCAATTTTTTATATGCACTGTCAAGACCCCCTGGCTGGATCAAAGGCATGTAGTATTTGGCCAAGTTTTGGAAGGCATGGACATTGTTAGGTTAATTGAATCACAGGATACGGATCGAGGTGACCGTCCAAGGAAGAAGGTGGTTATCATTGACTCGGGTGAGCTTCCAATAGCTTGA 786 0.4529 MAAAFSTSNVRSLPSPRSGTQIRAMYHKNSASSFKLTGFPTRSHICSSLSAFAGSLRLVTHTSSWNASSQERTRFTSLVRASSEEVPLQSKITHKVYFDISIGNPVGKLAGRVVIGLYGDDVPQTVENFRALCTGEKGFGYKDSTFHRVIKDFMIQGGDFDKGNGTGGKSIYGRTFKDENFKLSHVGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDIVRLIESQDTDRGDRPRKKVVIIDSGELPIA 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1576g00181 261 Gene3D - 81 260 IPR029000 -
Pral1576g00181 261 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 107 257 IPR002130 GO:0000413|GO:0003755
Pral1576g00181 261 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 141 158 IPR020892 GO:0003755|GO:0006457
Pral1576g00181 261 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 95 258 - -
Pral1576g00181 261 CDD cyclophilin_ABH_like 94 256 - -
Pral1576g00181 261 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 108 255 IPR002130 GO:0000413|GO:0003755
Pral1576g00181 261 SUPERFAMILY Cyclophilin-like 88 258 IPR029000 -
Pral1576g00181 261 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 117 132 IPR002130 GO:0000413|GO:0003755
Pral1576g00181 261 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 217 232 IPR002130 GO:0000413|GO:0003755
Pral1576g00181 261 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 146 158 IPR002130 GO:0000413|GO:0003755
Pral1576g00181 261 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 189 204 IPR002130 GO:0000413|GO:0003755
Pral1576g00181 261 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 204 216 IPR002130 GO:0000413|GO:0003755
Pral1576g00181 261 FunFam Peptidyl-prolyl cis-trans isomerase 81 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1576g00181 Pral-Chr1576 998724 1003202 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1576g00181 111 255 U-box Gene Family AT5G67530 47.945 8.59e-35 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1576g00181 K03768 - zju:107417611 389.423