Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1576g00179 ATGGCGGCTGCTTTTTCAACGGTGTCAAATGTCCGGTCTTTGCCGAGTCCACGAAGCGGTACTCAGATCAGAGCTATGTATCATAAGAATAGTGCGAGTTCATTTAAGCTCACGGGATTTCCTACGCGATCGCATATATGCTCCTCACTGAGCGCCTTTGCCGGTTCGTTGCGTTTGGTGACTCACACCTCTTCTTGGAATGCTTCTTCTCAAGAAAGAACGCGTTTTACCAGCTTGGTTCGGGCCAGTTCTGAGGAAGTACCTTTACAATCAAAAATTACTCACAAGGTGTATTTTGACATAAGTATTGGAAATCCCGTGGGAAAGCTTGCTGGAAGGGTTGTGATTGGACTCTATGGTGATGATGTGCCCCAAACAGTAGAGAACTTTCGTGCACTTTGCACAGGAGAGAAAGGCTTTGGGTACAAAGATTCTACATTTCATCGTGTGATAAAGGATTTCATGATTCAGGGAGGGGACTTTGACAAGGGGAATGGAACTGGAGGTAAAAGTATTTATGGCCGCACTTTCAAAGATGAGAATTTCAAGTTGTCTCATGTAGGACCAGGAGTTGTTAGCATGGCAAATGCAGGGCCCAACACCAATGGGAGTCAATTTTTTATATGCACTGTCAAGACCCCCTGGCTGGATCAAAGGCATGTAGTATTTGGCCAAGTTTTGGAAGGCATGGACATTGTTAGGTTAATTGAATCACAGGATACGGATCGAGGTGACCGTCCAAGGAAGAAGGTGGTTATCATTGACTCGGGTGAGCTTCCAATAGCTTGA 789 0.4537 MAAAFSTVSNVRSLPSPRSGTQIRAMYHKNSASSFKLTGFPTRSHICSSLSAFAGSLRLVTHTSSWNASSQERTRFTSLVRASSEEVPLQSKITHKVYFDISIGNPVGKLAGRVVIGLYGDDVPQTVENFRALCTGEKGFGYKDSTFHRVIKDFMIQGGDFDKGNGTGGKSIYGRTFKDENFKLSHVGPGVVSMANAGPNTNGSQFFICTVKTPWLDQRHVVFGQVLEGMDIVRLIESQDTDRGDRPRKKVVIIDSGELPIA 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1576g00179 262 CDD cyclophilin_ABH_like 95 257 - -
Pral1576g00179 262 Gene3D - 82 261 IPR029000 -
Pral1576g00179 262 FunFam Peptidyl-prolyl cis-trans isomerase 82 262 - -
Pral1576g00179 262 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 96 259 - -
Pral1576g00179 262 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 142 159 IPR020892 GO:0003755|GO:0006457
Pral1576g00179 262 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 108 258 IPR002130 GO:0000413|GO:0003755
Pral1576g00179 262 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 205 217 IPR002130 GO:0000413|GO:0003755
Pral1576g00179 262 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 190 205 IPR002130 GO:0000413|GO:0003755
Pral1576g00179 262 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 218 233 IPR002130 GO:0000413|GO:0003755
Pral1576g00179 262 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 IPR002130 GO:0000413|GO:0003755
Pral1576g00179 262 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 147 159 IPR002130 GO:0000413|GO:0003755
Pral1576g00179 262 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 109 256 IPR002130 GO:0000413|GO:0003755
Pral1576g00179 262 SUPERFAMILY Cyclophilin-like 89 259 IPR029000 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1576g00179 Pral-Chr1576 987328 1003202 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1576g00179 112 256 U-box Gene Family AT5G67530 47.945 7.47e-35 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1576g00179 K03768 - zju:107417611 394.045