Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1576g00162 ATGGATGATAATGGAGGCTCCAAATTGACTGGAATTAGACAGATTGTGAGACTAAAGGAGATAATTCAGAAGTGGCAATCTGTCACGATGGGCTCAAAAGTTAACTATCAACCTTCTGACTTGAATCACAGGAGCATAGCACCAATAGTTAACAGAAGGCTGAGAAATGTCATGTACTGTGACTCGGATGAAGAAAGCTACCAGAGCCCTGAGCCACCACCTGATGTTCCCAAAGGATATTTGGCTGTCTATGTCGGGCCAGAGCTTCGGAGGTTTATCATTCCCACCAGCTACCTTAGTCACTCTCTATTCAAAGCACTGCTGGAAAAGGCTGCAGACGAATTCGGGTTTGAGCAAAGTGGTGGGCTCACTATCCCGTGTGAGATTGAGACTTTTAAATACCTCCTGAACTGCATGGAGAACAATCAGAAAGATCAACACGATGAAAGCTCCTCTGGAAATGTAGGAACTACTGAAAAGTGA 483 0.4451 MDDNGGSKLTGIRQIVRLKEIIQKWQSVTMGSKVNYQPSDLNHRSIAPIVNRRLRNVMYCDSDEESYQSPEPPPDVPKGYLAVYVGPELRRFIIPTSYLSHSLFKALLEKAADEFGFEQSGGLTIPCEIETFKYLLNCMENNQKDQHDESSSGNVGTTEK 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1576g00162 160 Pfam Auxin responsive protein 70 138 IPR003676 GO:0009733
Pral1576g00162 160 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 55 135 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1576g00162 Pral-Chr1576 873244 874135 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1576g00162 1 153 Calmodulin-binding Proteins AT5G20810 69.231 9.23e-76 222
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1576g00162 K14488 - cpap:110808074 239.965