Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1576g00142 ATGGGGTTCTGTGTTGAGGATTCAATCTCAGGCTTGACATTAGGCCAAGCAATATATGAGGCTGCTCTAATAATTGCGGTTCTGAGATGGGTGTTTTGCTGGGTTTCCAAGGTCATCAATGATCGGAGGAGCCAGGCCTCGTCAGAAAACTCTTCATCGTCATCATGGGTGTGCTGCCAGATGATAAGAGACAGTACTCTAACACTTAGGACCTTTGGCGAAATGGTGGAGAGAGTGCCGGAAACACAGGATACGTGTGCTGTGTGCTTGAACCAGCTGACAATGGAGGATGAGGTTCGAGAGCTCATGAATTGTGACCATGTCTTTCACAGAGAGTGCATAGACAGATGGTTGGATCATGATCACGACAATCACAACCCCACCTGCCCACTCTGCAGAGCTCCTCTGCTTACTTCCTATTCTTCATCTGATTCTGAAAGCTCCAGCTGTATGCCACCCTCTCACCCTAGCTGGGCTGTGGAGAGGCTTCTCTATCTCTTTGGGGACGATCTGCCCCTTTGCTAA 525 0.4914 MGFCVEDSISGLTLGQAIYEAALIIAVLRWVFCWVSKVINDRRSQASSENSSSSSWVCCQMIRDSTLTLRTFGEMVERVPETQDTCAVCLNQLTMEDEVRELMNCDHVFHRECIDRWLDHDHDNHNPTCPLCRAPLLTSYSSSDSESSSCMPPSHPSWAVERLLYLFGDDLPLC 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1576g00142 174 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 72 151 IPR013083 -
Pral1576g00142 174 SMART ring_2 86 132 IPR001841 -
Pral1576g00142 174 Pfam Ring finger domain 84 133 IPR001841 -
Pral1576g00142 174 SUPERFAMILY RING/U-box 85 139 - -
Pral1576g00142 174 PANTHER RING ZINC FINGER PROTEIN-RELATED 26 170 - -
Pral1576g00142 174 ProSiteProfiles Zinc finger RING-type profile. 86 133 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1576g00142 Pral-Chr1576 787359 788452 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1576g00142 1 171 C3H Transcription Factor Family AT5G20885 47.541 7.09e-43 139