Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1576g00138 ATGAAGAAAGAGAATCAGAATCTAAGAGCTATGCTGTGTCAGATCACTCAACGTTATGCTGTTCTTCAGAATCGCCTACTTATGACGACGCAGCATCAGCAAGAACAACCGCATCTAGAGTGTCATACTTTTCAGAAAGACAATAAAGGAGATGTCGGGGAGGAAGCAGCGTTGCCCATCCGGCAGTTCTTGGATATCCATGAGCCTTCTCCTTCAGAAAGCAACAAATCAGAAGGATTTAGTTCTCACAGGAACAGCATCATGTGCAGCAAACCTGCATGTGAAGCGAACAGCAATAATGCCAAAAACATAGACGACGATCAAGCATCTTATCAGGCAAATTCTTGCAGAAAAGTTAGGGTGTCCATAAGGACTCGTTCGGATCTTTCTTTGATCGGTGATGGGTGTCAATGGAGAAAGTATGGACAAAAGATAGCCAAGGGAAACCCATGTCCTCGGGCTTACTATCGTTGCAACATGGGAACTGCGTGTCCGGTCCGTAAGCAGGTGCAAAGGTGTGCTAAGGATAAGAGTATTGTGATTACAAGCTATGAAGGGAAGCATAATCACGCACTCCCTGCGGCAGCCGCACCCATGGCTGCGGCCACGTCAGCAGCATTGAGCATGTTCCTCTCTGGCTCAACCAGCAGTGCACAAGGAAGCAGGCAATCAAACTCAGGCCTCTTCTCTTCTGCCTTTGCTTCCTTGTCTACAACCTCACCATGTCCTACCATAACACTGGACTTGACCCATCCCTCCAATCAATTTATGCAATTCCAAACGTCTGCCGCATCAACCCACTCCCATCACCCATTTCCTTTTGCTTTGGATGGTTATGACACTCAACAATCTCACAAGCTTCCCACAACGAACGTGTCCTTGGTGGATGTCATCAGTGCGGCTTTAGTTAAAGATCCTTCATTCAAGGCGGCTTTAGCTGCGTCCATTTCTTCATTTGCCGGAGCCACCTCATTGCAGCGTTAA 984 0.4736 MKKENQNLRAMLCQITQRYAVLQNRLLMTTQHQQEQPHLECHTFQKDNKGDVGEEAALPIRQFLDIHEPSPSESNKSEGFSSHRNSIMCSKPACEANSNNAKNIDDDQASYQANSCRKVRVSIRTRSDLSLIGDGCQWRKYGQKIAKGNPCPRAYYRCNMGTACPVRKQVQRCAKDKSIVITSYEGKHNHALPAAAAPMAAATSAALSMFLSGSTSSAQGSRQSNSGLFSSAFASLSTTSPCPTITLDLTHPSNQFMQFQTSAASTHSHHPFPFALDGYDTQQSHKLPTTNVSLVDVISAALVKDPSFKAALAASISSFAGATSLQR 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1576g00138 327 SUPERFAMILY WRKY DNA-binding domain 124 193 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral1576g00138 327 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 321 IPR044810 GO:0003700
Pral1576g00138 327 Pfam WRKY DNA -binding domain 134 190 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral1576g00138 327 SMART WRKY_cls 132 192 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral1576g00138 327 ProSiteProfiles WRKY domain profile. 127 193 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral1576g00138 327 Gene3D WRKY domain 116 194 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1576g00138 Pral-Chr1576 765116 767620 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1576g00138 3 319 WRKY Transcription Factor Family AT4G04450 37.895 9.79e-64 206
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral1576g00138 WRKY 6.1e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1576g00138 - - pcin:129319814 503.442