Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1576g00137 ATGGAAGGAAAAGTTGCAGCGGAAGAATTGGTGGAAGCTGAGGAAAAGCCACGGCACACATGTGATAATAATATTACAGATGCATCACAGAAGAATGATATTTTGGGATCCAGTATTCTCAGTTTGAGTCTGAACAACCCAGAAGTGCATCGTCACAAAACTGATGAGCAGCCGGCAGCCCAATTGGGATTGCTGCGAGAAAAGCTGGAGGAAATGAAGAAAGAGAATCAGAATCTAAGAGCTATGCTGTGTCAGATCACTCAACGTTATGCTGTTCTTCAGAATCGCCTACTTATGACGACGCAGCATCAGCAAGAACAACCGCATCTAGAGTGTCATACTTTTCAGAAAGACAATAAAGGAGATGTCGGGGAGGAAGCAGCGTTGCCCATCCGGCAGTTCTTGGATATCCATGAGCCTTCTCCTTCAGAAAGCAACAAATCAGAAGGATTTAGTTCTCACAGGAACAGCATCATGTGCAGCAAACCTGCATGTGAAGCGAACAGCAATAATGCCAAAAACATAGACGACGATCAAGCATCTTATCAGGCAAATTCTTGCAGAAAAGTTAGGGTGTCCATAAGGACTCGTTCGGATCTTTCTTTGATCGGTGATGGGTGTCAATGGAGAAAGTATGGACAAAAGATAGCCAAGGGAAACCCATGTCCTCGGGCTTACTATCGTTGCAACATGGGAACTGCGTGTCCGGTCCGTAAGCAGGTGCAAAGGTGTGCTAAGGATAAGAGTATTGTGATTACAAGCTATGAAGGGAAGCATAATCACGCACTCCCTGCGGCAGCCGCACCCATGGCTGCGGCCACGTCAGCAGCATTGAGCATGTTCCTCTCTGGCTCAACCAGCAGTGCACAAGGAAGCAGGCAATCAAACTCAGGCCTCTTCTCTTCTGCCTTTGCTTCCTTGTCTACAACCTCACCATGTCCTACCATAACACTGGACTTGACCCATCCCTCCAATCAATTTATGCAATTCCAAACGTCTGCCGCATCAACCCACTCCCATCACCCATTTCCTTTTGCTTTGGATGGTTATGACACTCAACAATCTCACAAGCTTCCCACAACGAACGTGTCCTTGGTGGATGTCATCAGTGCGGCTTTAGTTAAAGATCCTTCATTCAAGGCGGCTTTAGCTGCGTCCATTTCTTCATTTGCCGGAGCCACCTCATTGCAGCGTTAA 1197 0.4695 MEGKVAAEELVEAEEKPRHTCDNNITDASQKNDILGSSILSLSLNNPEVHRHKTDEQPAAQLGLLREKLEEMKKENQNLRAMLCQITQRYAVLQNRLLMTTQHQQEQPHLECHTFQKDNKGDVGEEAALPIRQFLDIHEPSPSESNKSEGFSSHRNSIMCSKPACEANSNNAKNIDDDQASYQANSCRKVRVSIRTRSDLSLIGDGCQWRKYGQKIAKGNPCPRAYYRCNMGTACPVRKQVQRCAKDKSIVITSYEGKHNHALPAAAAPMAAATSAALSMFLSGSTSSAQGSRQSNSGLFSSAFASLSTTSPCPTITLDLTHPSNQFMQFQTSAASTHSHHPFPFALDGYDTQQSHKLPTTNVSLVDVISAALVKDPSFKAALAASISSFAGATSLQR 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1576g00137 398 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 48 392 IPR044810 GO:0003700
Pral1576g00137 398 Pfam WRKY DNA -binding domain 205 261 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral1576g00137 398 Coils Coil 62 85 - -
Pral1576g00137 398 ProSiteProfiles WRKY domain profile. 198 264 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral1576g00137 398 Gene3D WRKY domain 187 265 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pral1576g00137 398 SMART WRKY_cls 203 263 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pral1576g00137 398 SUPERFAMILY WRKY DNA-binding domain 195 264 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1576g00137 Pral-Chr1576 765116 768084 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1576g00137 65 390 WRKY Transcription Factor Family AT4G04450 38.046 1.64e-65 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pral1576g00137 WRKY 8.3e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1576g00137 - - pcin:129319814 577.4