Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral1576g00129 ATGGTCATCTTAAGACTGGGCAACACCCGCAAGGAGAAGGAAGAAGGAATGAGGCTTGCCAATTACGAAATCGGCACAACTCTGGGCAGTGGCAGCTTCGGAAAGGTGAAATTGGCCAAACACATCGATTCTCATAAACTCTTTGCCCTCAAGATCATCGACAAGACCAAGATCATTCACCTCAATATCGCTCATCAGATAAAGAGGGAGATAGCCACCCTCAAGCTTCTGAAGCATCCCAACGTCGTCAGATTACACGAGGTTTTAGCTAGCAAAACGAACATTTACATGGTCTTGGAGTACGTTGCTGGAGGAGAGTTGTTTGACAGAATTGCATCCAAAGGTAGGCTTAAAGAAGCTGAAGGCAGGAAGCTTTTCCAACAGTTAATTGATGGTGTGAGCTACTGTCACAATAAAGGTGTCTTCCACAGGGATCTTAAGCTGGAGAATGTACTGGTGGATGCCCAAGGCAACATAAAGATAACCGATTTTGGCCTCAGTGCTTTGCCCCAGCACATTAGGGCCGATGGGTTGCTGCACACAACCTGCGGAAGTCCCAGCTATGTTGCTCCCGAGGTCCTTGCTAATAGAGGCTATGAAGGTGCAACATCAGATACATGGTCATGTGGTATTATCTTGTTTGTAATTCTAACGGGATATCTTCCTTTTGAAGATCGGAACATGGCCGTTCTCTATCAAAAGATATCCAAAGGAGATGTCCGGATACCAAAATGGCTATCACCTGGTGCCCAAAACTTGCTAAGGAGGATTCTTGACCCCAATCCTCTTACCCGGATAACACTGGCCGGCGTCAAAGAAGATGAGTGGTTCAGGCACGAAAATGTTCCATCAAATCCTGAGGACGAAGAAGAGGGAGAGAAAAAGAATGCGTGCACCGACGATGAAGCCTTTTCAACCCGTGACGTGCCACGTGAAGCAGAACAGAAGAGTCCTGATTCATCAACCCTTATCAATGCATTTCAGTTGATAGCAATGTCTTCATGCTTAGATCTCTCAGGCTTCTTTGAGAAAGAGGATGTTTCTGAGAGGAAGATGAGATTTACATCCAATCATGCAGCAAAAGATCTGATCGCAAAGATTGAAGATATTGGAACAGGAATGGGATTTAGAGTCCAGAAGAAAAATGGAAAAGTAAGTATTATTGCCTATTTTTAG 1176 0.4481 MVILRLGNTRKEKEEGMRLANYEIGTTLGSGSFGKVKLAKHIDSHKLFALKIIDKTKIIHLNIAHQIKREIATLKLLKHPNVVRLHEVLASKTNIYMVLEYVAGGELFDRIASKGRLKEAEGRKLFQQLIDGVSYCHNKGVFHRDLKLENVLVDAQGNIKITDFGLSALPQHIRADGLLHTTCGSPSYVAPEVLANRGYEGATSDTWSCGIILFVILTGYLPFEDRNMAVLYQKISKGDVRIPKWLSPGAQNLLRRILDPNPLTRITLAGVKEDEWFRHENVPSNPEDEEEGEKKNACTDDEAFSTRDVPREAEQKSPDSSTLINAFQLIAMSSCLDLSGFFEKEDVSERKMRFTSNHAAKDLIAKIEDIGTGMGFRVQKKNGKVSIIAYF 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral1576g00129 391 CDD CIPK_C 325 383 - -
Pral1576g00129 391 Pfam NAF domain 322 380 IPR004041 GO:0007165
Pral1576g00129 391 Gene3D Kinase associated domain 1, KA1 320 389 - -
Pral1576g00129 391 ProSiteProfiles Protein kinase domain profile. 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1576g00129 391 SMART serkin_6 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1576g00129 391 FunFam Non-specific serine/threonine protein kinase 13 101 - -
Pral1576g00129 391 ProSitePatterns Protein kinases ATP-binding region signature. 28 51 IPR017441 GO:0005524
Pral1576g00129 391 Gene3D Transferase(Phosphotransferase) domain 1 104 306 - -
Pral1576g00129 391 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Pral1576g00129 391 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 16 380 - -
Pral1576g00129 391 SUPERFAMILY Protein kinase-like (PK-like) 19 300 IPR011009 -
Pral1576g00129 391 Pfam Protein kinase domain 22 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral1576g00129 391 Gene3D Phosphorylase Kinase; domain 1 8 103 - -
Pral1576g00129 391 MobiDBLite consensus disorder prediction 277 315 - -
Pral1576g00129 391 MobiDBLite consensus disorder prediction 277 320 - -
Pral1576g00129 391 FunFam Non-specific serine/threonine protein kinase 15 321 - -
Pral1576g00129 391 ProSiteProfiles NAF domain profile. 319 343 IPR018451 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral1576g00129 Pral-Chr1576 744264 747300 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral1576g00129 85 387 CBL-interacting serine-threonine protein kinases AT3G17510 68.317 2.86e-149 425
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pral1576g00129 Pkinase 6.2e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral1576g00129 K07198 - qsa:O6P43_003749 593.193